BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022348
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   460   e-127
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   421   e-115
ref|XP_002872270.1| pentatricopeptide repeat-containing protein ...   394   e-107
ref|NP_198098.1| pentatricopeptide repeat-containing protein [Ar...   393   e-107

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Vitis vinifera]
          Length = 475

 Score =  460 bits (1184), Expect = e-127
 Identities = 229/357 (64%), Positives = 277/357 (77%)
 Frame = +3

Query: 6    LHLLRFYVKERDTVKAEALMTKMNDSGLIVSAHPLNEMMKLYVATSQSEKVVFVIQHMKR 185
            L LL  YVKER   KAEALM K+ND GL VS HP NEMMKLY+ATSQ E+V  VI  MK+
Sbjct: 116  LPLLHAYVKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQ 175

Query: 186  NKIPRNVLSYNLWMTALGXXXXXXXXXXXFKQMEMDKHVVVGWSTLATLADIYLKAGLVD 365
            NKIP NVLSYNLWM+A             +K M  DK+V VGWSTL+TLA+IYLK+GL+ 
Sbjct: 176  NKIPLNVLSYNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIK 235

Query: 366  KATLAVNAAEKKLSAVNRLGYIFLLTIYTSLNNKDAVLRLWEACKKVDGEITCTNYMTII 545
            KA LA+  AEKKLSA NRLGY FL+T+Y SL+NK+ VLRLWEA KKV G IT TNYM I+
Sbjct: 236  KANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCIL 295

Query: 546  SSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAYTRNGNTEKAEALHLRTLERGGQ 725
              LVKLGDI EAE IF EWES+C KYDIRVSN+LLGAY R G+ +KAE+LHL TLERGG 
Sbjct: 296  LCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGC 355

Query: 726  PNYKTWEILMEGWVKNQDMEKAINAMKKGFALLKHCNWRPSPSIVATIAEYFEQTGDIIG 905
            PNYKTWEILMEGW+K+Q+M+KAINAMKKGF++LKHC+WRP+  +V  IA Y E+ G++  
Sbjct: 356  PNYKTWEILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVND 415

Query: 906  ANRYVEFIRRYGLASIPVYKSLLRLHICNQKPIGDIIVMMRKDNIELDDELSTLIQS 1076
             N+YV+ I + G+A +P+YKSLLR+H+  Q+P+ DI+ MM KD IE+DDE S L+Q+
Sbjct: 416  LNQYVKVIHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQA 472


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  425 bits (1093), Expect = e-116
 Identities = 212/357 (59%), Positives = 265/357 (74%), Gaps = 2/357 (0%)
 Frame = +3

Query: 6    LHLLRFYVKERDTVKAEALMTKMNDSGLIVSAHPLNEMMKLYVATSQSEKVVFVIQHMKR 185
            L LL  YVKERD  KAE+ M K++ SGL+V+ HP NEMMKLY+A SQ EKV  VI  MKR
Sbjct: 151  LPLLHGYVKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKR 210

Query: 186  NKIPRNVLSYNLWMTALGXXXXXXXXXXXFKQMEMDKHVVVGWSTLATLADIYLKAGLVD 365
            NK+ RNVLSYNLWM A G           +K+M  D++V VGWSTLA+LA++Y+KAG VD
Sbjct: 211  NKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAGFVD 270

Query: 366  KATLAVNAAEKKLSAVNRLGYIFLLTIYTSLNNKDAVLRLWEACKKVDGEITCTNYMTII 545
            KA L +  AE KLS   RLGY FL+T+Y+SL NK+ VLRLWEA K V G I C +YM +I
Sbjct: 271  KALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVI 330

Query: 546  SSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAYTRNGNTEKAEALHLRTLERGGQ 725
            S LVK+GD+  AE++F EWE+ C KYDIRVSN+LLGAY RNG   KAE+ HL T+ERGG 
Sbjct: 331  SCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGC 390

Query: 726  PNYKTWEILMEGWVKNQDMEKAINAMKKGFALLK--HCNWRPSPSIVATIAEYFEQTGDI 899
            PNYKTWEILMEGWVK+Q M+KAI+AMKKGF++LK   C+WRPS SI+  IAE+FE+ G+ 
Sbjct: 391  PNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNF 450

Query: 900  IGANRYVEFIRRYGLASIPVYKSLLRLHICNQKPIGDIIVMMRKDNIELDDELSTLI 1070
              AN Y++ +   G+A++P+YK  LR+++  Q+P  DI+ MM KD IELDDE S L+
Sbjct: 451  EDANHYIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  421 bits (1082), Expect = e-115
 Identities = 209/355 (58%), Positives = 264/355 (74%)
 Frame = +3

Query: 12   LLRFYVKERDTVKAEALMTKMNDSGLIVSAHPLNEMMKLYVATSQSEKVVFVIQHMKRNK 191
            LL  YVK +D VKAEALM K+ + GLIV+ +P NEMMKLY+ATSQ EKV  VI  MKRNK
Sbjct: 137  LLHGYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNK 196

Query: 192  IPRNVLSYNLWMTALGXXXXXXXXXXXFKQMEMDKHVVVGWSTLATLADIYLKAGLVDKA 371
            I  N+LSYNLWM++ G           +K+M  D +V VGWSTLATLA+IY KAG+VDKA
Sbjct: 197  IALNLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKA 256

Query: 372  TLAVNAAEKKLSAVNRLGYIFLLTIYTSLNNKDAVLRLWEACKKVDGEITCTNYMTIISS 551
             LA+  AEK LS  + LGY FL+T Y+SL NK+ V RLWEACK V+G ITC NYM ++S 
Sbjct: 257  LLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSC 316

Query: 552  LVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAYTRNGNTEKAEALHLRTLERGGQPN 731
            LVK+GD+ EAE++F +WE  CRKYDIRVSN+LLGAY R G   KAE+LHL TL+RGG PN
Sbjct: 317  LVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPN 376

Query: 732  YKTWEILMEGWVKNQDMEKAINAMKKGFALLKHCNWRPSPSIVATIAEYFEQTGDIIGAN 911
            YKT EILMEGWVK+Q M+KAI+AM +  ++L+HC+WRPS  I+ +IAE+ E+  +   AN
Sbjct: 377  YKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDAN 436

Query: 912  RYVEFIRRYGLASIPVYKSLLRLHICNQKPIGDIIVMMRKDNIELDDELSTLIQS 1076
             +++ I   G+AS+P+YK LLR+H+  Q+   DI+ MM KD IELDDE S L+Q+
Sbjct: 437  HFIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQA 491


>ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318107|gb|EFH48529.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 492

 Score =  394 bits (1011), Expect = e-107
 Identities = 195/350 (55%), Positives = 245/350 (70%)
 Frame = +3

Query: 3    FLHLLRFYVKERDTVKAEALMTKMNDSGLIVSAHPLNEMMKLYVATSQSEKVVFVIQHMK 182
            +L LLR YVK++   + E  M K+N  G +V+ HP NEMMKLY A+ Q EKVV V+  MK
Sbjct: 143  YLPLLRSYVKKKMVKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMK 202

Query: 183  RNKIPRNVLSYNLWMTALGXXXXXXXXXXXFKQMEMDKHVVVGWSTLATLADIYLKAGLV 362
             NKIPRNVLSYNLWM A             +++M  DK V VGWS+L TLA++Y+K G  
Sbjct: 203  VNKIPRNVLSYNLWMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFD 262

Query: 363  DKATLAVNAAEKKLSAVNRLGYIFLLTIYTSLNNKDAVLRLWEACKKVDGEITCTNYMTI 542
            +KA L +  AEK L+  NRLGY FL+T+Y SL +K+ V+RLWEA K V G I+C NY+ +
Sbjct: 263  EKAKLVLENAEKLLNRSNRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICV 322

Query: 543  ISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAYTRNGNTEKAEALHLRTLERGG 722
            +SSLVK+GD+ EAE +F EWE+QC  YD+RVSN+LLGAY RNG   KAE+LH R LERGG
Sbjct: 323  LSSLVKIGDLEEAERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGG 382

Query: 723  QPNYKTWEILMEGWVKNQDMEKAINAMKKGFALLKHCNWRPSPSIVATIAEYFEQTGDII 902
             PNYKTWEILMEGWVK Q MEKAI AM + F L+K C+WRPS SIV  IA+YFE+   I 
Sbjct: 383  NPNYKTWEILMEGWVKCQSMEKAIVAMHRAFELMKGCHWRPSESIVMAIAKYFEEEEKIE 442

Query: 903  GANRYVEFIRRYGLASIPVYKSLLRLHICNQKPIGDIIVMMRKDNIELDD 1052
             AN Y+  +   GLAS+P+Y+ LLR+    Q+P  DI  MM+ D I +D+
Sbjct: 443  EANTYIRDLHHLGLASLPLYRLLLRMQEHAQRPAFDIYEMMKLDKIGIDE 492


>ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122214236|sp|Q3E911.1|PP400_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g27460 gi|332006308|gb|AED93691.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 491

 Score =  393 bits (1009), Expect = e-107
 Identities = 195/346 (56%), Positives = 246/346 (71%)
 Frame = +3

Query: 3    FLHLLRFYVKERDTVKAEALMTKMNDSGLIVSAHPLNEMMKLYVATSQSEKVVFVIQHMK 182
            +L LLR YVK +   +AEALM K+N  G +V+ HP NEMMKLY A+ Q EKVV V+  MK
Sbjct: 146  YLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMK 205

Query: 183  RNKIPRNVLSYNLWMTALGXXXXXXXXXXXFKQMEMDKHVVVGWSTLATLADIYLKAGLV 362
             NKIPRNVLSYNLWM A             +K+M  DK V VGWS+L TLA++Y+K+G  
Sbjct: 206  GNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFD 265

Query: 363  DKATLAVNAAEKKLSAVNRLGYIFLLTIYTSLNNKDAVLRLWEACKKVDGEITCTNYMTI 542
            +KA L +  AEK L+  NRLGY FL+T+Y SL NK+ V+RLWE  K V G I+C NY+ +
Sbjct: 266  EKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICV 325

Query: 543  ISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAYTRNGNTEKAEALHLRTLERGG 722
            +SSLVK GD+ EAE +F+EWE+QC  YD+RVSN+LLGAY RNG   KAE+LH   LERGG
Sbjct: 326  LSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGG 385

Query: 723  QPNYKTWEILMEGWVKNQDMEKAINAMKKGFALLKHCNWRPSPSIVATIAEYFEQTGDII 902
             PNYKTWEILMEGWVK ++MEKAI+AM + F L++ C+WRPS +IV  IAEYFE+   I 
Sbjct: 386  TPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIE 445

Query: 903  GANRYVEFIRRYGLASIPVYKSLLRLHICNQKPIGDIIVMMRKDNI 1040
             A  YV  + R GLAS+P+Y+ LLR+H   ++P  DI  MM+ D +
Sbjct: 446  EATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491