BLASTX nr result

ID: Angelica23_contig00022173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022173
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25
ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2...   116   8e-24
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   115   1e-23
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   114   3e-23
emb|CBI35665.3| unnamed protein product [Vitis vinifera]              114   3e-23

>ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|222841187|gb|EEE78734.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/97 (60%), Positives = 74/97 (76%)
 Frame = -2

Query: 438 KWMGPTIKMSLPSYSGRTEHNPHLLKYSCQIECRVKPTSLAKVLRPSSEQSDRTQDPDCK 259
           KW GP IKMSLPS+SGRTE+NP LLKYSC IECRV+    AKV RPS       ++   +
Sbjct: 185 KWKGPAIKMSLPSFSGRTEYNPSLLKYSCNIECRVRAVRAAKVSRPSLTSKQDAEESLSE 244

Query: 258 HSDDKRNLSIDVMLSKPILALQFNCLKMDVESPLIVS 148
           H  +++NL+I VMLSKPILAL+F+CLKM VE+P++VS
Sbjct: 245 H--ERQNLTISVMLSKPILALEFSCLKMQVEAPVVVS 279


>ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  116 bits (290), Expect = 8e-24
 Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 12/109 (11%)
 Frame = -2

Query: 438 KWMGPTIKMSLPSYSGRTEHNPHLLKYSCQIECRVKPTSLAKVLRPSS------EQSD-- 283
           KW GP IKMSLPS+SGRTE+NP+LLKY+C IECRV+    AKV  PSS      E+S   
Sbjct: 190 KWKGPAIKMSLPSFSGRTEYNPNLLKYTCSIECRVRAVQAAKVSGPSSPPKHDTEESQSQ 249

Query: 282 ---RTQDPDCKH-SDDKRNLSIDVMLSKPILALQFNCLKMDVESPLIVS 148
              +T +P  +   D+ +NLSI VMLSKPILAL+ +CLKM VE+P++VS
Sbjct: 250 LKLKTVEPSSRELLDEGQNLSISVMLSKPILALELSCLKMQVEAPVVVS 298


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  115 bits (289), Expect = 1e-23
 Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 12/110 (10%)
 Frame = -2

Query: 438  KWMGPTIKMSLPSYSGRTEHNPHLLKYSCQIECRVKPTSLAKVLRPSSEQSDRTQDP--- 268
            KWMGP IKMSLPS+SGRTEHNP+LLKYSC IECRV+    A++  P      RT++    
Sbjct: 715  KWMGPAIKMSLPSFSGRTEHNPNLLKYSCNIECRVRAVRPAEISVPFPASKHRTEESLGH 774

Query: 267  -DCKHS--------DDKRNLSIDVMLSKPILALQFNCLKMDVESPLIVSH 145
             +CK +        D+ +NLS+ VMLS+PILAL+FN LKM VE+P  VSH
Sbjct: 775  HNCKIADSVTGEILDNGQNLSLSVMLSRPILALEFNYLKMQVEAPSPVSH 824


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  114 bits (285), Expect = 3e-23
 Identities = 59/122 (48%), Positives = 77/122 (63%), Gaps = 16/122 (13%)
 Frame = -2

Query: 462  AVSELNSGKWMGPTIKMSLPSYSGRTEHNPHLLKYSCQIECRVKPTSLAKVLRPS---SE 292
            AV  L   KWMGP IKMSLPS+SG T +NP+LLKYSCQIECRV+    A+V  PS     
Sbjct: 705  AVPLLKPEKWMGPAIKMSLPSFSGHTVYNPNLLKYSCQIECRVRAVKPARVSSPSPGPKN 764

Query: 291  QSDRTQDPDCKHS-------------DDKRNLSIDVMLSKPILALQFNCLKMDVESPLIV 151
            + +  ++   +H              ++  NL + VMLSKP+LAL+FNCL M VE+P++V
Sbjct: 765  EKENEKEGSPRHQIFSSMDSTAVETIENGENLCVSVMLSKPVLALEFNCLNMQVEAPIVV 824

Query: 150  SH 145
            SH
Sbjct: 825  SH 826


>emb|CBI35665.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  114 bits (285), Expect = 3e-23
 Identities = 59/122 (48%), Positives = 77/122 (63%), Gaps = 16/122 (13%)
 Frame = -2

Query: 462 AVSELNSGKWMGPTIKMSLPSYSGRTEHNPHLLKYSCQIECRVKPTSLAKVLRPS---SE 292
           AV  L   KWMGP IKMSLPS+SG T +NP+LLKYSCQIECRV+    A+V  PS     
Sbjct: 193 AVPLLKPEKWMGPAIKMSLPSFSGHTVYNPNLLKYSCQIECRVRAVKPARVSSPSPGPKN 252

Query: 291 QSDRTQDPDCKHS-------------DDKRNLSIDVMLSKPILALQFNCLKMDVESPLIV 151
           + +  ++   +H              ++  NL + VMLSKP+LAL+FNCL M VE+P++V
Sbjct: 253 EKENEKEGSPRHQIFSSMDSTAVETIENGENLCVSVMLSKPVLALEFNCLNMQVEAPIVV 312

Query: 150 SH 145
           SH
Sbjct: 313 SH 314


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