BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022068
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   509   e-142
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   494   e-137
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   491   e-137
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D sub...   489   e-136
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerase D sub...   484   e-134

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  509 bits (1310), Expect = e-142
 Identities = 246/344 (71%), Positives = 288/344 (83%), Gaps = 5/344 (1%)
 Frame = +3

Query: 3    DEKQGEVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXXDCR 182
            DE QGEVRIF D GR+LRPLLV+ N+ KIK++  GDYGFQSLLDN            DCR
Sbjct: 644  DELQGEVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCR 703

Query: 183  TAWGIEHLRTENGGDLPIKYTHCELDMSFILGLSCGLIPFANHNHAKRVLYQSQKHSHQA 362
            TAWG+E++   +  + P KYTHCELDMSF+LGLSCG+IPFANH+HA+RVLYQS+KHS QA
Sbjct: 704  TAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQA 763

Query: 363  IGYSTTNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCA 527
            IG+ST NP  R DT THQLYYPQ+PLFRTML+D LG+P C      + P RPE++NGQCA
Sbjct: 764  IGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLP-RPEYFNGQCA 822

Query: 528  IVAVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKVEDLMKFGK 707
            IVAVNVH GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA +K  K+ED + FGK
Sbjct: 823  IVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGK 882

Query: 708  IQSRVGRVDSLEEDGFPYIGASLRAGDIVIGKHTESGADQSLKLKHTERGTVQRVVLSAN 887
             QS++GRVDSL++DGFP+IGA+L++GDI+IGK +ESGAD S+KLKHTERG VQ+V+LSAN
Sbjct: 883  TQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSAN 942

Query: 888  DEGKNFGVVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPF 1019
            DEGKNF VVSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPF
Sbjct: 943  DEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPF 986


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  494 bits (1272), Expect = e-137
 Identities = 242/344 (70%), Positives = 280/344 (81%), Gaps = 5/344 (1%)
 Frame = +3

Query: 3    DEKQGEVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXXDCR 182
            DE+  EVR+F DAGR+LRPLLV+ N+ KIK+   GDY FQSLLD             DCR
Sbjct: 451  DEQHREVRVFSDAGRILRPLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCR 510

Query: 183  TAWGIEHLRTENGGDLPIKYTHCELDMSFILGLSCGLIPFANHNHAKRVLYQSQKHSHQA 362
            TAWGI +L  EN     +KYTHCELDMSF+LGLS  +IPFANH+HA+RVLYQS+KHS QA
Sbjct: 511  TAWGINYLFMENEAKATVKYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQA 570

Query: 363  IGYSTTNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCA 527
            +G++TTNP IR DT THQLYYPQ+PLFRTM+SDCLG+P        I P R E++NGQCA
Sbjct: 571  MGFNTTNPNIRVDTNTHQLYYPQRPLFRTMVSDCLGKPGYPLGHNGIVP-RAEYFNGQCA 629

Query: 528  IVAVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKVEDLMKFGK 707
            IVAVNVH GYNQEDSLVMNRAS ERGMFRSEHIRSYKAD+ N+E+  K  K ED + FGK
Sbjct: 630  IVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVNFGK 689

Query: 708  IQSRVGRVDSLEEDGFPYIGASLRAGDIVIGKHTESGADQSLKLKHTERGTVQRVVLSAN 887
            +QS++GRVDSL++DGFP+IGA+L+ GDIV+G+  ESGAD S+KLKHTERG VQ+VVLSAN
Sbjct: 690  VQSKIGRVDSLDDDGFPFIGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSAN 749

Query: 888  DEGKNFGVVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPF 1019
            DEGKNF VVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPF
Sbjct: 750  DEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPF 793


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  491 bits (1265), Expect = e-137
 Identities = 239/344 (69%), Positives = 285/344 (82%), Gaps = 5/344 (1%)
 Frame = +3

Query: 3    DEKQGEVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXXDCR 182
            DE+QGEVRIF DAGR+LRPLLV+ N+ K+K+    D+ FQSLLD             DC 
Sbjct: 631  DEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCS 690

Query: 183  TAWGIEHLRTENGGDLPIKYTHCELDMSFILGLSCGLIPFANHNHAKRVLYQSQKHSHQA 362
            TAWGI++L  +   D P+KYTHCELDMSF+LGLSCG+IP+ANH+HA+RVLYQS+KHS QA
Sbjct: 691  TAWGIKYL-LKGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQA 749

Query: 363  IGYSTTNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCN-----ITPSRPEFYNGQCA 527
            IG+STTNP IR DT++HQLYYPQ+PLFRTM+SDCLG+P  +     I P RPE++NGQ A
Sbjct: 750  IGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVP-RPEYFNGQIA 808

Query: 528  IVAVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKVEDLMKFGK 707
            IVAVNVH GYNQEDSLVMNRAS ERGMFRSEHIRSYK+++ N E+  K +K ED + FGK
Sbjct: 809  IVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGK 868

Query: 708  IQSRVGRVDSLEEDGFPYIGASLRAGDIVIGKHTESGADQSLKLKHTERGTVQRVVLSAN 887
            +QS++GRVDSL++DGFP+IGA+L+ GDIVIG+  ESG D S+KLKHTERG VQ+VV+SAN
Sbjct: 869  MQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSAN 928

Query: 888  DEGKNFGVVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPF 1019
            D+GKNF VVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPF
Sbjct: 929  DDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPF 972


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine
            max]
          Length = 1205

 Score =  489 bits (1259), Expect = e-136
 Identities = 239/343 (69%), Positives = 282/343 (82%), Gaps = 4/343 (1%)
 Frame = +3

Query: 3    DEKQGEVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXXDCR 182
            D+ Q EVRI+ DAGR+LRPLLV+ N++KIK      Y FQSLLD             DC 
Sbjct: 638  DQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCC 697

Query: 183  TAWGIEHLRTENGGDLPIKYTHCELDMSFILGLSCGLIPFANHNHAKRVLYQSQKHSHQA 362
            TAWG+E+L  + G    +KYTHCELDMSF+LGLSC L+PFANH+HA+RVLYQSQKHS QA
Sbjct: 698  TAWGVEYLFGKEG-KRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQA 756

Query: 363  IGYSTTNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNI----TPSRPEFYNGQCAI 530
            IG+STTNP IR DT++HQL+YPQKPLFRTM SDCLG+PD ++     P + EFYNGQ AI
Sbjct: 757  IGFSTTNPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAI 816

Query: 531  VAVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKVEDLMKFGKI 710
            VAVNVH GYNQEDSLVMNRAS +RGMFRSEHIRSYK++I N+E+  K +K ED++ F K+
Sbjct: 817  VAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKL 876

Query: 711  QSRVGRVDSLEEDGFPYIGASLRAGDIVIGKHTESGADQSLKLKHTERGTVQRVVLSAND 890
            QS++GRVDSL++DGFPY+GA+L++GDI+IGK  ESGAD S+KLKHTERG VQ+VVLS+ND
Sbjct: 877  QSKIGRVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSND 936

Query: 891  EGKNFGVVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPF 1019
            EGKNF VVSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPF
Sbjct: 937  EGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPF 979


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine
            max]
          Length = 1205

 Score =  484 bits (1247), Expect = e-134
 Identities = 238/346 (68%), Positives = 281/346 (81%), Gaps = 7/346 (2%)
 Frame = +3

Query: 3    DEKQGEVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXXDCR 182
            D+ Q EVRI+ DAGR+LRPLLV+ N++KIK        FQSLLD             DC 
Sbjct: 635  DQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVIELIGPEEEEDCC 694

Query: 183  TAWGIEHLRTENGGDLPIKYTHCELDMSFILGLSCGLIPFANHNHAKRVLYQSQKHSHQA 362
            TAWG+E+L  + G    +KYTHCELDMSF+LGLSC L+PFANH+HA+RVLYQSQKHS QA
Sbjct: 695  TAWGVEYLFGKEG-KRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQA 753

Query: 363  IGYSTTNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNI-------TPSRPEFYNGQ 521
            IG+STTNP IR DT++HQL+YPQKPLFRTM SDCLG+PD ++        P + EFYNGQ
Sbjct: 754  IGFSTTNPNIRVDTLSHQLHYPQKPLFRTMASDCLGKPDNSLGQNKISKIPPKAEFYNGQ 813

Query: 522  CAIVAVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKVEDLMKF 701
             AIVAVNVH GYNQEDSLVMNRAS +RGMFRSEHIRSYK++I N+E+  K +K ED++ F
Sbjct: 814  NAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNF 873

Query: 702  GKIQSRVGRVDSLEEDGFPYIGASLRAGDIVIGKHTESGADQSLKLKHTERGTVQRVVLS 881
             K+QS++GRVDSL++DGFPY+GA+L++GDI+IGK  ESGAD S+KLKHTERG VQ+VVLS
Sbjct: 874  AKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKGAESGADNSVKLKHTERGYVQKVVLS 933

Query: 882  ANDEGKNFGVVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPF 1019
            +NDEGKNF VVSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPF
Sbjct: 934  SNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPF 979