BLASTX nr result

ID: Angelica23_contig00022039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022039
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44336.1| unknown [Lotus japonicus]                               61   1e-07
ref|XP_003623247.1| F-box family protein [Medicago truncatula] g...    61   1e-07
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    61   1e-07
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003622917.1| F-box protein [Medicago truncatula] gi|35549...    59   2e-07

>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = -2

Query: 269 LPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEKRLICNAH 108
           LP++++ EIL R PV+SLL+F+CV K W L IS P F+ KHL  S++  + N H
Sbjct: 63  LPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQSTLFNHH 116


>ref|XP_003623247.1| F-box family protein [Medicago truncatula]
           gi|355498262|gb|AES79465.1| F-box family protein
           [Medicago truncatula]
          Length = 396

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = -2

Query: 272 TLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEK 129
           TLP D++ EILYR PV+SL++FKCV K W   ISHP+F  KH   S K
Sbjct: 48  TLPFDLVLEILYRLPVKSLMQFKCVCKSWKSFISHPKFAKKHFCVSTK 95


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 284 LAGKTLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLK 141
           + G  LPED++ EIL R PV++LL+FKCV K WY  I+ P F+ KHL+
Sbjct: 37  MTGHPLPEDVVIEILSRLPVKNLLQFKCVCKSWYAIITSPNFISKHLR 84


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = -2

Query: 290 ENLAGKTLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEKRLICNA 111
           E + G  LPED+I EIL R PV++LL+FKCV K W+  I+ P+ + KHL+        N 
Sbjct: 38  ETMTGDPLPEDVIIEILSRLPVKNLLQFKCVCKSWHAIITSPKLISKHLR--------NY 89

Query: 110 HDSTELTRKLVCYVRVTQ 57
           +D  +    L  Y RVTQ
Sbjct: 90  YDKNDSDCLLAQY-RVTQ 106


>ref|XP_003622917.1| F-box protein [Medicago truncatula] gi|355497932|gb|AES79135.1|
           F-box protein [Medicago truncatula]
          Length = 720

 Score = 59.3 bits (142), Expect(2) = 2e-07
 Identities = 30/61 (49%), Positives = 41/61 (67%)
 Frame = -2

Query: 269 LPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEKRLICNAHDSTELT 90
           LP+++ITE+L R  V+SL+R KCVSKYW   IS PRF+  H+K S +    NAH +  L 
Sbjct: 26  LPDELITEVLSRGDVKSLMRMKCVSKYWNSMISDPRFVKLHMKQSAR----NAHLTLSLC 81

Query: 89  R 87
           +
Sbjct: 82  K 82



 Score = 20.8 bits (42), Expect(2) = 2e-07
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -1

Query: 42  GDNE*--YPVEGLLEN 1
           GDN    YPV GL+EN
Sbjct: 87  GDNNVVPYPVRGLIEN 102


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