BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022010
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t...   497   e-138
ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arab...   496   e-138
gb|AAT70180.1| MSH4 [Arabidopsis thaliana]                            496   e-138
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   493   e-137
ref|XP_002262998.2| PREDICTED: mutS protein homolog 4-like, part...   488   e-136

>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
            gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
            mismatch repair protein MSH4; Short=AtMSH4; AltName:
            Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
            DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  497 bits (1280), Expect = e-138
 Identities = 251/353 (71%), Positives = 277/353 (78%)
 Frame = +1

Query: 31   MEDDASEKSTFVVALIENRAKEVGVAAFDLRSASLHLSQYIETSRSYQNTKTLMHFYDPM 210
            MEDD  E+S+FV  LIENRAKEVG+AAFDLRSASLHLSQYIETS SYQNTKTL+ FYDP 
Sbjct: 1    MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPS 60

Query: 211  VIIVPPNKLAPDSMVGVSEFVDRFYSTTRKVVMMRGCFDDTTGAVMVKNLAAKEPSALGL 390
            VIIVPPNKLA D MVGVSE VDR YST RKVV  RGCFDDT GAV+++NLAA+EP ALGL
Sbjct: 61   VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL 120

Query: 391  DSYYKQYYLCLXXXXXTIKWIEAEKGIIITNHSLLVTFNGSYDHMNIDATSVHNLEIIEP 570
            D+YYKQ+YL L     TIKWIEAEKG+I+TNHSL VTFNGS+DHMNIDATSV NLE+I+P
Sbjct: 121  DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLELIDP 180

Query: 571  LQSTLWGTTNKKRSLFQXXXXXXXXXXXXXXXANLLQPLKDIETIKARLDCLDELMTNEQ 750
              + L GT+NKKRSLFQ               ANLLQPLKDIETI  RLDCLDELM+NEQ
Sbjct: 181  FHNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ 240

Query: 751  LFFGLSQALRKFPKETDRVLCHFCFKPKKVTKEVLGIDNARXXXXXXXXXXXXXXXXXXX 930
            LFFGLSQ LRKFPKETDRVLCHFCFKPKKVT+ V+G +N R                   
Sbjct: 241  LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIILLKTALDAL 300

Query: 931  XXXSSVLKDAKSFLLGNVYNSVCENEKYASIRKRIGEEIDEDVLHARVPFVAR 1089
               + VLKDAK FLL NVY SVCEN++YASIRK+IGE ID+DVLHARVPFVAR
Sbjct: 301  PILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVAR 353


>ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arabidopsis lyrata subsp.
            lyrata] gi|297315943|gb|EFH46366.1| hypothetical protein
            ARALYDRAFT_493139 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  496 bits (1277), Expect = e-138
 Identities = 250/353 (70%), Positives = 277/353 (78%)
 Frame = +1

Query: 31   MEDDASEKSTFVVALIENRAKEVGVAAFDLRSASLHLSQYIETSRSYQNTKTLMHFYDPM 210
            MEDD  E+S+FV  LIENRAKEVG+AAFDLRSASLHLSQYIETS SYQNTKTL+ FYDP 
Sbjct: 1    MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPS 60

Query: 211  VIIVPPNKLAPDSMVGVSEFVDRFYSTTRKVVMMRGCFDDTTGAVMVKNLAAKEPSALGL 390
            VIIVPPNKLA D MVGVSE VDR YST RKVV  RGCFDDT GAV+++NLAA+EP ALGL
Sbjct: 61   VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL 120

Query: 391  DSYYKQYYLCLXXXXXTIKWIEAEKGIIITNHSLLVTFNGSYDHMNIDATSVHNLEIIEP 570
            D+YYKQ+YL L     TIKWIEAEKG+I+TNHSL +TFNGS+DHMNIDATSV NLEII+P
Sbjct: 121  DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTITFNGSFDHMNIDATSVENLEIIDP 180

Query: 571  LQSTLWGTTNKKRSLFQXXXXXXXXXXXXXXXANLLQPLKDIETIKARLDCLDELMTNEQ 750
              + L GT+NKKRSLFQ               ANLLQPLKDIETI  RLDCLDELM+NEQ
Sbjct: 181  FHNALLGTSNKKRSLFQMFKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ 240

Query: 751  LFFGLSQALRKFPKETDRVLCHFCFKPKKVTKEVLGIDNARXXXXXXXXXXXXXXXXXXX 930
            LFFGLSQ LRKFP+ETDRVLCHFCFKPKKVT+ V+G +N R                   
Sbjct: 241  LFFGLSQVLRKFPQETDRVLCHFCFKPKKVTEAVIGFENTRRSQNMISSIILLKTALDAL 300

Query: 931  XXXSSVLKDAKSFLLGNVYNSVCENEKYASIRKRIGEEIDEDVLHARVPFVAR 1089
               + VLKDAK FLL NVY SVCEN++YASIRK+IGE ID+DVLHARVPFVAR
Sbjct: 301  PLLAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVAR 353


>gb|AAT70180.1| MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  496 bits (1276), Expect = e-138
 Identities = 250/353 (70%), Positives = 277/353 (78%)
 Frame = +1

Query: 31   MEDDASEKSTFVVALIENRAKEVGVAAFDLRSASLHLSQYIETSRSYQNTKTLMHFYDPM 210
            MEDD  E+S+FV  LIENRAKEVG+AAFDLRSASLHLSQYIETS SYQNTKTL+ FYDP 
Sbjct: 1    MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPS 60

Query: 211  VIIVPPNKLAPDSMVGVSEFVDRFYSTTRKVVMMRGCFDDTTGAVMVKNLAAKEPSALGL 390
            VIIVPPNKLA D MVGVSE VDR YST RKVV  RGCFDDT GAV+++NLAA+EP ALGL
Sbjct: 61   VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL 120

Query: 391  DSYYKQYYLCLXXXXXTIKWIEAEKGIIITNHSLLVTFNGSYDHMNIDATSVHNLEIIEP 570
            D+YYKQ+YL L     TIKWIEAEKG+I+TNHSL VTFNGS+DHMNIDATSV NLE+I+P
Sbjct: 121  DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLELIDP 180

Query: 571  LQSTLWGTTNKKRSLFQXXXXXXXXXXXXXXXANLLQPLKDIETIKARLDCLDELMTNEQ 750
              + L GT+NKKRSLFQ               ANLLQPLKDIETI  RLDCLDELM+NEQ
Sbjct: 181  FHNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ 240

Query: 751  LFFGLSQALRKFPKETDRVLCHFCFKPKKVTKEVLGIDNARXXXXXXXXXXXXXXXXXXX 930
            LFFGLSQ LRKFP+ETDRVLCHFCFKPKKVT+ V+G +N R                   
Sbjct: 241  LFFGLSQVLRKFPEETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIILLKTALDAL 300

Query: 931  XXXSSVLKDAKSFLLGNVYNSVCENEKYASIRKRIGEEIDEDVLHARVPFVAR 1089
               + VLKDAK FLL NVY SVCEN++YASIRK+IGE ID+DVLHARVPFVAR
Sbjct: 301  PILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVAR 353


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  493 bits (1268), Expect = e-137
 Identities = 245/352 (69%), Positives = 274/352 (77%)
 Frame = +1

Query: 31   MEDDASEKSTFVVALIENRAKEVGVAAFDLRSASLHLSQYIETSRSYQNTKTLMHFYDPM 210
            MEDD  E S+FVV +IENRAKEVG+AAFDLRSASLHLSQYIETS SYQNTKTL+HFYDP+
Sbjct: 1    MEDDGGESSSFVVGIIENRAKEVGLAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPI 60

Query: 211  VIIVPPNKLAPDSMVGVSEFVDRFYSTTRKVVMMRGCFDDTTGAVMVKNLAAKEPSALGL 390
            VII+PPNKLA +S  GV+E VDRFY + ++V++ RGCFDDT GA+++KNLAAKEPSALGL
Sbjct: 61   VIIIPPNKLASNSTAGVTELVDRFYGSVKQVMLARGCFDDTKGAILIKNLAAKEPSALGL 120

Query: 391  DSYYKQYYLCLXXXXXTIKWIEAEKGIIITNHSLLVTFNGSYDHMNIDATSVHNLEIIEP 570
            D+YYKQYYLCL     T+KW EAEKG+++TNHSL VTFNGS+DHMNID+TS+ NLEIIEP
Sbjct: 121  DTYYKQYYLCLAAAAATLKWTEAEKGVVVTNHSLSVTFNGSFDHMNIDSTSIQNLEIIEP 180

Query: 571  LQSTLWGTTNKKRSLFQXXXXXXXXXXXXXXXANLLQPLKDIETIKARLDCLDELMTNEQ 750
              STL GT+NKKRSLF                ANLLQPLKDIETI ARLDCLDELM+NEQ
Sbjct: 181  FHSTLLGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240

Query: 751  LFFGLSQALRKFPKETDRVLCHFCFKPKKVTKEVLGIDNARXXXXXXXXXXXXXXXXXXX 930
            LFFGL Q LRKFPKETDRVLCHFCFK KKVT E L +D A+                   
Sbjct: 241  LFFGLCQILRKFPKETDRVLCHFCFKAKKVTAEALAVDRAKKSQVLVSSVILLKTALDAL 300

Query: 931  XXXSSVLKDAKSFLLGNVYNSVCENEKYASIRKRIGEEIDEDVLHARVPFVA 1086
               S VLKD KS LL N+Y SVCENEKY  IRKRIGE IDEDVLHARVPFVA
Sbjct: 301  PLLSKVLKDVKSSLLSNIYKSVCENEKYDLIRKRIGEVIDEDVLHARVPFVA 352


>ref|XP_002262998.2| PREDICTED: mutS protein homolog 4-like, partial [Vitis vinifera]
          Length = 456

 Score =  488 bits (1257), Expect = e-136
 Identities = 258/365 (70%), Positives = 277/365 (75%), Gaps = 12/365 (3%)
 Frame = +1

Query: 31   MEDDASEKSTFVVALIENRAKEVGVAAFDLRSASLHLSQYIETSRSYQNTKTLMHFYDPM 210
            MEDD  E+S+FV+ LIENRAKEVGVAAFDLR ASLHLSQYIETS SYQNTKTL+HFYDPM
Sbjct: 1    MEDDGRERSSFVIGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLHFYDPM 60

Query: 211  VIIVPPNKLAPDSMVGVSEFVDRFYSTTRKVVMMRGCFDDTTGAVMVKNLAAKEPSALGL 390
            VIIV PNKLAPD MVGVSE VDRFY   +KVVM R CFDDT GAV++KNLAAKEPSALGL
Sbjct: 61   VIIVSPNKLAPDGMVGVSELVDRFYFAVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGL 120

Query: 391  DSYYKQYYLCLXXXXXTIKWI--------EAEKGIIITNHS----LLVTFNGSYDHMNID 534
            D+YYKQYYLCL     TIK I        + +  I+    S    ++VTFNGS+DHMNID
Sbjct: 121  DTYYKQYYLCLAAAAATIKCIAFFFPKDVKLQYAILEDLSSCDKLMMVTFNGSFDHMNID 180

Query: 535  ATSVHNLEIIEPLQSTLWGTTNKKRSLFQXXXXXXXXXXXXXXXANLLQPLKDIETIKAR 714
            ATSV NLEIIEPL S+LWGT+NKKRSLF                ANLLQPLKDIETI AR
Sbjct: 181  ATSVQNLEIIEPLHSSLWGTSNKKRSLFHMLKTTKTTGGTRLLRANLLQPLKDIETINAR 240

Query: 715  LDCLDELMTNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTKEVLGIDNARXXXXXXX 894
            LDCLDELM+NEQLFFGLSQ LRKFPKETDRVLCHFCFKPKKVTKEVLG++ AR       
Sbjct: 241  LDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTKEVLGVEYARKNQMLIS 300

Query: 895  XXXXXXXXXXXXXXXSSVLKDAKSFLLGNVYNSVCENEKYASIRKRIGEEIDEDVLHARV 1074
                           S VLKDAKSFLL NVY SVC NE YASIRKRIGE IDEDVLHARV
Sbjct: 301  SIILLKTALDALPLLSKVLKDAKSFLLANVYKSVCANETYASIRKRIGEVIDEDVLHARV 360

Query: 1075 PFVAR 1089
            PFVAR
Sbjct: 361  PFVAR 365