BLASTX nr result

ID: Angelica23_contig00021117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00021117
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vi...   118   4e-25
emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]   117   7e-25
gb|AFK36510.1| unknown [Lotus japonicus]                              117   1e-24
gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]        117   1e-24
ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cu...   116   2e-24

>ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
           gi|297741766|emb|CBI32995.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/61 (95%), Positives = 60/61 (98%)
 Frame = +3

Query: 3   LLVDGGPIDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVDRMHTPIN 182
           LLVDGGPI EKLKL+TQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIV+RMHTPIN
Sbjct: 255 LLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVERMHTPIN 314

Query: 183 R 185
           R
Sbjct: 315 R 315


>emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]
          Length = 278

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/61 (93%), Positives = 60/61 (98%)
 Frame = +3

Query: 3   LLVDGGPIDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVDRMHTPIN 182
           LLVDGGPI EKLKL+TQNLHYVNVLPSIGLNVYSILLHDTLVMSR+AVNKIV+RMHTPIN
Sbjct: 218 LLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRBAVNKIVERMHTPIN 277

Query: 183 R 185
           R
Sbjct: 278 R 278


>gb|AFK36510.1| unknown [Lotus japonicus]
          Length = 305

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/61 (93%), Positives = 61/61 (100%)
 Frame = +3

Query: 3   LLVDGGPIDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVDRMHTPIN 182
           LLVDGGPI+EKLKL+TQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIV+RMHTPI+
Sbjct: 245 LLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVERMHTPIS 304

Query: 183 R 185
           R
Sbjct: 305 R 305


>gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
          Length = 300

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/61 (90%), Positives = 61/61 (100%)
 Frame = +3

Query: 3   LLVDGGPIDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVDRMHTPIN 182
           L+V+GGPIDEKLKL+TQNLHYVN++PSIGLNVYSILLHDTLVMSRDAVNKIV+RMHTPIN
Sbjct: 240 LVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLVMSRDAVNKIVERMHTPIN 299

Query: 183 R 185
           R
Sbjct: 300 R 300


>ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
           gi|449531047|ref|XP_004172499.1| PREDICTED: 50S
           ribosomal protein L4-like [Cucumis sativus]
          Length = 315

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = +3

Query: 3   LLVDGGPIDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVDRMHTPIN 182
           LLVDGGPIDEKLKL+TQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV +IV RMHTPIN
Sbjct: 255 LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTRMHTPIN 314

Query: 183 R 185
           R
Sbjct: 315 R 315


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