BLASTX nr result

ID: Angelica23_contig00020968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020968
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002321411.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arab...    64   1e-08
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    63   2e-08
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    62   4e-08

>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
 Frame = -2

Query: 308 LTQDLITEILFKLPVKTLLCCKSVSKPWLSLISSPNFIISHLKHAITKGEADQTFIVH-- 135
           L++DLI EIL+KLP+K+LL C S+ K W SLI SP FI  HL+H I+  +    F++   
Sbjct: 5   LSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTISSTDRQNLFLLRLC 64

Query: 134 ERADNSMYLLNLDSP--QPKASLGFPYCRGDYSFQPDYKLVGSCNG 3
            R     Y L LD+        L FP+     S +  + ++GS NG
Sbjct: 65  SREREEQYSLRLDNQDFNEHMQLHFPF----KSSESYFHVIGSSNG 106


>ref|XP_002321411.1| predicted protein [Populus trichocarpa] gi|222868407|gb|EEF05538.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/99 (41%), Positives = 55/99 (55%)
 Frame = -2

Query: 299 DLITEILFKLPVKTLLCCKSVSKPWLSLISSPNFIISHLKHAITKGEADQTFIVHERADN 120
           D++ +IL +LPVKTLL  KSVSKP LS+I++P FI SHL H  TK  +      H+    
Sbjct: 12  DMVIDILSRLPVKTLLRFKSVSKPMLSVITNPRFITSHL-HQSTKNSSLVFHFSHDEFPI 70

Query: 119 SMYLLNLDSPQPKASLGFPYCRGDYSFQPDYKLVGSCNG 3
           SM  L    P     +  P    D+S +P  ++ GSC G
Sbjct: 71  SM--LYYTEPTTLRVVHIPPSMKDHSLKPRIRIKGSCGG 107


>ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arabidopsis lyrata subsp.
           lyrata] gi|297313606|gb|EFH44029.1| hypothetical protein
           ARALYDRAFT_329378 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/102 (35%), Positives = 54/102 (52%)
 Frame = -2

Query: 308 LTQDLITEILFKLPVKTLLCCKSVSKPWLSLISSPNFIISHLKHAITKGEADQTFIVHER 129
           +  D+IT++  +LP  TL+ C+ +SKP  SLI SPNFI SHL   +  G+     ++  R
Sbjct: 4   IPMDIITDLFLRLPATTLVRCRILSKPCFSLIDSPNFIESHLNQTLQSGD---HLMILLR 60

Query: 128 ADNSMYLLNLDSPQPKASLGFPYCRGDYSFQPDYKLVGSCNG 3
               +  +NLDSP     +  P   G  +     ++ GSCNG
Sbjct: 61  GPRLLCTVNLDSPDKVTDVEHPLKTGGLT-----EVFGSCNG 97


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 308 LTQDLITEILFKLPVKTLLCCKSVSKPWLSLISSPNFIISHLKHAI 171
           L  ++I EIL +LP K LLCC+SVSKPW +LI  PNF+  HLKH++
Sbjct: 4   LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSM 49


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/102 (39%), Positives = 56/102 (54%)
 Frame = -2

Query: 308 LTQDLITEILFKLPVKTLLCCKSVSKPWLSLISSPNFIISHLKHAITKGEADQTFIVHER 129
           L  +L+TEIL +LPV  LL  +S+SK W + I  PNFI +HLK +  +  ++ T I    
Sbjct: 5   LPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKS-RETNSNLTLIFAGS 63

Query: 128 ADNSMYLLNLDSPQPKASLGFPYCRGDYSFQPDYKLVGSCNG 3
             +  Y +NLDS      L  P  +G      + K+VGSCNG
Sbjct: 64  HPDYFYNVNLDSLNSIIKLENP-IKGPTDASHNIKIVGSCNG 104


Top