BLASTX nr result

ID: Angelica23_contig00020962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020962
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311842.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    78   6e-13
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                78   6e-13
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...    77   1e-12
ref|XP_002309340.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>ref|XP_002311842.1| predicted protein [Populus trichocarpa] gi|222851662|gb|EEE89209.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/109 (38%), Positives = 61/109 (55%)
 Frame = +3

Query: 3   KLGLPEKDMVAENARIYGFSGEAVKVMGAIRLPITLGEGFLSIIQMMEFMVLDQESSHNA 182
           K+G+    M      + G  G AV + GA+ L IT+G     +     FMV+D    +NA
Sbjct: 140 KMGMNASRMTLVPTPLIGIEGSAVPMKGAVGLTITIGTAPHYVTLQQTFMVIDTHLPYNA 199

Query: 183 LVGRPLLKEMKVVTSIYHLTIKFPTPNGVGTVQGSQHVSRECYHKAIKG 329
           ++ RPLL ++ VV S  +LT+KFPT   V  V+G+Q  SREC +  +KG
Sbjct: 200 IIRRPLLHQISVVVSTKYLTMKFPTVKVVVVVKGNQEASRECANTCLKG 248


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 36/103 (34%), Positives = 63/103 (61%)
 Frame = +3

Query: 3   KLGLPEKDMVAENARIYGFSGEAVKVMGAIRLPITLGEGFLSIIQMMEFMVLDQESSHNA 182
           K+G+   D+V   + +  F+ E+   +G I+LP+   +    + ++++F+V D+ +++N 
Sbjct: 565 KMGISRGDIVGPPSPLVAFTSESAMSLGTIKLPVLAKK----VSKIVDFVVFDKPAAYNI 620

Query: 183 LVGRPLLKEMKVVTSIYHLTIKFPTPNGVGTVQGSQHVSRECY 311
           ++G P +  MK V S Y+  IKFPT NGV T++G Q  SR CY
Sbjct: 621 ILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRGDQEASRTCY 663


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   KLGLPEKDMVAENARIYGFSGEAVKVMGAIRLPITLGEGFLSIIQMMEFMVLDQESSHNA 182
           K+ +PE ++   N +I GFS E V   G I L  T G+ +LS    + +++++  +S+N 
Sbjct: 672 KMKIPEAEIQPYNEQIVGFSRERVDTKGFIDLYTTFGDDYLSKTINIRYLLVNANTSYNI 731

Query: 183 LVGRPLLKEMKVVTSIYHLTIKFPTPNG-VGTVQGSQHVSRECYHKAIK 326
           L+GRP +  +K + S  HL +KFP+ NG + TV   Q  +RECY  ++K
Sbjct: 732 LLGRPSINRLKAIVSTPHLAMKFPSVNGDIATVHIDQKTARECYVASLK 780


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/100 (38%), Positives = 60/100 (60%)
 Frame = +3

Query: 3   KLGLPEKDMVAENARIYGFSGEAVKVMGAIRLPITLGEGFLSIIQMMEFMVLDQESSHNA 182
           ++G+ +KD+    + +  F+ E   ++  I LP+T       I++M+EF V D+ +++N 
Sbjct: 498 RMGISKKDIKGALSPLVSFTSETSMLLRTITLPVTAQ----GIVKMIEFTVFDRPAAYNI 553

Query: 183 LVGRPLLKEMKVVTSIYHLTIKFPTPNGVGTVQGSQHVSR 302
           ++G P L EMK V S YH  +KFPTP GV  + GSQ  SR
Sbjct: 554 ILGTPWLYEMKAVPSTYHQCVKFPTPTGVKQILGSQRTSR 593


>ref|XP_002309340.1| predicted protein [Populus trichocarpa] gi|222855316|gb|EEE92863.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/109 (33%), Positives = 60/109 (55%)
 Frame = +3

Query: 3   KLGLPEKDMVAENARIYGFSGEAVKVMGAIRLPITLGEGFLSIIQMMEFMVLDQESSHNA 182
           ++G+P   +      + G  G  V V GA++LPI +G     ++    FMV+    ++NA
Sbjct: 223 QMGIPSSKLTPVKTFLVGIEGPGVLVKGALKLPIVMGTSSKCVLLQQSFMVIYMALAYNA 282

Query: 183 LVGRPLLKEMKVVTSIYHLTIKFPTPNGVGTVQGSQHVSRECYHKAIKG 329
           ++GRPLL ++  + S  +L +KFPT  G  TV G Q +SR+     +KG
Sbjct: 283 ILGRPLLHQINAIISTRYLALKFPTQKG-ATVSGDQTISRQFATTCLKG 330


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