BLASTX nr result

ID: Angelica23_contig00020864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020864
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl...   186   5e-45
emb|CBI33662.3| unnamed protein product [Vitis vinifera]              186   5e-45
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl...   181   1e-43
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ...   181   2e-43
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin...   180   4e-43

>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488272|ref|XP_003633730.1|
           PREDICTED: 30S ribosomal protein 3, chloroplastic-like
           isoform 2 [Vitis vinifera]
          Length = 176

 Score =  186 bits (472), Expect = 5e-45
 Identities = 87/128 (67%), Positives = 101/128 (78%)
 Frame = +2

Query: 218 TNINCKITHLNASSAAAVEXXXXXXXXXXXXPLQSKKLGVVVKPMEKPRLVLKFVWMEKN 397
           TN+  + +     + A  E            PL  +KLGVVVKPMEKPRLVLKF+WMEKN
Sbjct: 48  TNLRLRASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKN 107

Query: 398 IGLALDQVIPGHGSIPLSPYYFWPRKDAWEELKIMLERKPWISQKQVVILLNQATDIINL 577
           IG+ALDQ IPGHG+IPLSPYYFWPRKDAWEE+K++LE KPWISQKQ++ILLNQATDIINL
Sbjct: 108 IGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINL 167

Query: 578 WQQSGGDL 601
           WQQSGG+L
Sbjct: 168 WQQSGGNL 175


>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  186 bits (472), Expect = 5e-45
 Identities = 87/128 (67%), Positives = 101/128 (78%)
 Frame = +2

Query: 218 TNINCKITHLNASSAAAVEXXXXXXXXXXXXPLQSKKLGVVVKPMEKPRLVLKFVWMEKN 397
           TN+  + +     + A  E            PL  +KLGVVVKPMEKPRLVLKF+WMEKN
Sbjct: 47  TNLRLRASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKN 106

Query: 398 IGLALDQVIPGHGSIPLSPYYFWPRKDAWEELKIMLERKPWISQKQVVILLNQATDIINL 577
           IG+ALDQ IPGHG+IPLSPYYFWPRKDAWEE+K++LE KPWISQKQ++ILLNQATDIINL
Sbjct: 107 IGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINL 166

Query: 578 WQQSGGDL 601
           WQQSGG+L
Sbjct: 167 WQQSGGNL 174


>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
           sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
           ribosomal protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 192

 Score =  181 bits (460), Expect = 1e-43
 Identities = 81/93 (87%), Positives = 91/93 (97%)
 Frame = +2

Query: 323 KKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQVIPGHGSIPLSPYYFWPRKDAWEELKIM 502
           +KLGVVVKPMEKPRLVLKF+WMEKNIG+ALDQ+IPGHG+IPLSPYYFWPRKDAWEELK++
Sbjct: 99  EKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVL 158

Query: 503 LERKPWISQKQVVILLNQATDIINLWQQSGGDL 601
           LE KPWISQKQ++ILLNQATDIINLWQQ GG+L
Sbjct: 159 LESKPWISQKQMIILLNQATDIINLWQQGGGNL 191


>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
           gi|217075300|gb|ACJ86010.1| unknown [Medicago
           truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
           protein [Medicago truncatula]
           gi|388491518|gb|AFK33825.1| unknown [Medicago
           truncatula]
          Length = 161

 Score =  181 bits (458), Expect = 2e-43
 Identities = 82/97 (84%), Positives = 92/97 (94%)
 Frame = +2

Query: 311 PLQSKKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQVIPGHGSIPLSPYYFWPRKDAWEE 490
           P QS+KLGVVVKP +KPRLVLKF+WMEKNIG+ LDQ+IPGHG+IPLSPYYFWPRKDAWEE
Sbjct: 63  PPQSQKLGVVVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEE 122

Query: 491 LKIMLERKPWISQKQVVILLNQATDIINLWQQSGGDL 601
           LK +LE KPWISQKQ++ILLNQATDIINLWQQSGG+L
Sbjct: 123 LKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 159


>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
           gi|255628049|gb|ACU14369.1| unknown [Glycine max]
          Length = 158

 Score =  180 bits (456), Expect = 4e-43
 Identities = 81/95 (85%), Positives = 91/95 (95%)
 Frame = +2

Query: 317 QSKKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQVIPGHGSIPLSPYYFWPRKDAWEELK 496
           Q +KLGVVVKP EKPRLVLKF+WMEKNIG+ALDQ++PGHG+IPLSPYYFWPRKDAWEELK
Sbjct: 63  QPEKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELK 122

Query: 497 IMLERKPWISQKQVVILLNQATDIINLWQQSGGDL 601
            +LE KPWISQKQ++ILLNQATDIINLWQQSGG+L
Sbjct: 123 ELLENKPWISQKQMIILLNQATDIINLWQQSGGNL 157


Top