BLASTX nr result

ID: Angelica23_contig00020855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020855
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              352   4e-95
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   311   7e-83
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...   308   1e-81
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...   307   1e-81
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia...   306   3e-81

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  352 bits (903), Expect = 4e-95
 Identities = 173/261 (66%), Positives = 200/261 (76%), Gaps = 24/261 (9%)
 Frame = +1

Query: 4   DNKVFSVRIVSIDYYMSPPIPDFDISYSSFQGGKVKEVPVIRIYGSTPAGQKTCLHIHRA 183
           D K+FSVRIVS+DYYM+PPIPD DI YSSFQGG VKEVPVIRIYGSTP GQKTCLH+HRA
Sbjct: 7   DAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVHRA 66

Query: 184 LPYLYVPCSELSLRPEHDGDACTHALSLAIEKALKLKGNAGSKRQHVHGCSVVQARKLYG 363
           LPYLYVPC++L  +   + D  THA+SL +EKALKLKGNAGSKRQHVHGCS+V+A+  YG
Sbjct: 67  LPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKALKLKGNAGSKRQHVHGCSLVRAKNFYG 126

Query: 364 YKSSEEFFVKIFL---YYPQDVSRAANLLVGGAILDKVLQPHESHVPFLLQFLIDHNLYG 534
           Y SSEE FVKI+L   Y+P DVSRAANLL+GG++LDK LQPHESH+PFLLQFLID+NLYG
Sbjct: 127 YHSSEELFVKIYLNISYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLIDYNLYG 186

Query: 535 MGHLHVSRMMFRIPVPDGSWSK---------------------AKVDSSGNACLGLPLWT 651
           MGHLH+S+M FR PVPD   S+                      + DSSG+ CL  P+W 
Sbjct: 187 MGHLHLSKMKFRHPVPDVFSSRKVNYNGQQKLEPDDFACISAHLQADSSGDTCLSSPVWI 246

Query: 652 SLTIPDGWIWQQSSQLDPPIG 714
           S TIP GW+WQ SSQLD   G
Sbjct: 247 SSTIPGGWMWQFSSQLDASPG 267


>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222413 [Cucumis sativus]
          Length = 2868

 Score =  311 bits (798), Expect = 7e-83
 Identities = 154/261 (59%), Positives = 195/261 (74%), Gaps = 27/261 (10%)
 Frame = +1

Query: 1   SDNKVFSVRIVSIDYYMSPPIPDFDISYSSFQGGKVKEVPVIRIYGSTPAGQKTCLHIHR 180
           S+++VFSVRIVSIDYY++PPIP  DISYSSFQGGKV EVPV+RIYGSTPAGQKTC+H+H 
Sbjct: 6   SESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHG 65

Query: 181 ALPYLYVPCSELSLRPEHD----GDACTHALSLAIEKALKLKGNAGSKRQHVHGCSVVQA 348
            LPYLYVPCSE+ L P +D    G+A  + +SLA+EKALKLKGN+GSKRQHVHG ++V+A
Sbjct: 66  VLPYLYVPCSEILL-PLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYNLVRA 124

Query: 349 RKLYGYKSSEEFFVKIFLYYPQDVSRAANLLVGGAILDKVLQPHESHVPFLLQFLIDHNL 528
           +KLYGY SSEEFF+KI+LYYPQD++RAANLL+ GA+L+K LQP+ESH+PF+LQFL+D+NL
Sbjct: 125 KKLYGYHSSEEFFIKIYLYYPQDITRAANLLLNGAVLEKSLQPYESHIPFVLQFLVDYNL 184

Query: 529 YGMGHLHVSRMMFRIPVPDGSWSK-----------------------AKVDSSGNACLGL 639
           YGMG LH+ ++ FR PVPD    K                        + D+S  A    
Sbjct: 185 YGMGLLHLVKLKFRHPVPDAPGKKLDEIFRYMHENHAMDNPNCMPSDPQADTSNEAASTS 244

Query: 640 PLWTSLTIPDGWIWQQSSQLD 702
           P+W S  IP  W+W+  + +D
Sbjct: 245 PVWISSKIPADWMWKFPTAMD 265


>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score =  308 bits (788), Expect = 1e-81
 Identities = 152/261 (58%), Positives = 193/261 (73%), Gaps = 27/261 (10%)
 Frame = +1

Query: 1   SDNKVFSVRIVSIDYYMSPPIPDFDISYSSFQGGKVKEVPVIRIYGSTPAGQKTCLHIHR 180
           S+++VFSVRIVSIDYY++PPIP  DISYSSFQGGKV EVPV+RIYGSTPAGQKTC+H+H 
Sbjct: 6   SESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHG 65

Query: 181 ALPYLYVPCSELSLRPEHD----GDACTHALSLAIEKALKLKGNAGSKRQHVHGCSVVQA 348
            LPYLYVPCSE+ L P +D    G+A  + +SLA+EKALKLKGN+GSKRQHVHG ++V+A
Sbjct: 66  VLPYLYVPCSEILL-PLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYNLVRA 124

Query: 349 RKLYGYKSSEEFFVKIFLYYPQDVSRAANLLVGGAILDKVLQPHESHVPFLLQFLIDHNL 528
           +KLYGY SSEE F+KI+LYYPQD++RAANLL+ GA+L+K  QP+ESH+PF+LQFL+D+NL
Sbjct: 125 KKLYGYHSSEELFIKIYLYYPQDITRAANLLLNGAVLEKSFQPYESHIPFVLQFLVDYNL 184

Query: 529 YGMGHLHVSRMMFRIPVPDGSWSK-----------------------AKVDSSGNACLGL 639
           YGMG LH+ ++ FR PVPD    K                        + D+S  A    
Sbjct: 185 YGMGLLHLVKLKFRHPVPDAPGKKLDEIFRYMHENHAMDNPNCMPSDPQADTSNEAASTS 244

Query: 640 PLWTSLTIPDGWIWQQSSQLD 702
           P+W S  IP  W+W+  + +D
Sbjct: 245 PVWISSKIPADWMWKFPTAMD 265


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
           lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
           ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score =  307 bits (787), Expect = 1e-81
 Identities = 152/259 (58%), Positives = 186/259 (71%), Gaps = 22/259 (8%)
 Frame = +1

Query: 1   SDNKVFSVRIVSIDYYMSPPIPDFDISYSSFQGGKVKEVPVIRIYGSTPAGQKTCLHIHR 180
           S + VFS+RIVSIDYYM+ PIP +DI YSSFQGG+V EVPVIRIYGSTPAGQKTCLHIHR
Sbjct: 6   SGSNVFSLRIVSIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTCLHIHR 65

Query: 181 ALPYLYVPCSELSLRPEHDGDACTHALSLAIEKALKLKGNAGSKRQHVHGCSVVQARKLY 360
           ALPYLY+PCSE+ L      D  T ALSL +EKALKLKGNA SKRQHVH C +V+A+K Y
Sbjct: 66  ALPYLYIPCSEIPLEHHKGADGSTLALSLELEKALKLKGNAASKRQHVHDCEIVRAKKFY 125

Query: 361 GYKSSEEFFVKIFL-----YYPQDVSRAANLLVGGAILDKVLQPHESHVPFLLQFLIDHN 525
           GY S+EE FVKI+L     Y+P DV+RAA+LL+ GA+L K LQP+ESH+PF+LQFL+D+N
Sbjct: 126 GYHSTEEAFVKIYLYPCNSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYN 185

Query: 526 LYGMGHLHVSRMMFRIPVPDGSWSK-----------------AKVDSSGNACLGLPLWTS 654
           LYGM H+H+S+M FR PVP     +                  K +SS  A +  P+W+ 
Sbjct: 186 LYGMCHVHISKMKFRSPVPHHFLPRRFDLEDCAGQRIDEVAITKANSSAAASVSFPIWSL 245

Query: 655 LTIPDGWIWQQSSQLDPPI 711
            TIP  W+W  S + D P+
Sbjct: 246 STIPGQWMWNISEESDTPL 264


>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
           gi|34330129|dbj|BAC82450.1| catalytic subunit of
           polymerase zeta [Arabidopsis thaliana]
           gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
           [Arabidopsis thaliana]
          Length = 1890

 Score =  306 bits (784), Expect = 3e-81
 Identities = 150/255 (58%), Positives = 186/255 (72%), Gaps = 18/255 (7%)
 Frame = +1

Query: 1   SDNKVFSVRIVSIDYYMSPPIPDFDISYSSFQGGKVKEVPVIRIYGSTPAGQKTCLHIHR 180
           S + VFS+RIVSIDYYM+ PIP ++I YSSFQG +V EVPVIRIYGSTPAGQKTCLHIHR
Sbjct: 6   SGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHR 65

Query: 181 ALPYLYVPCSELSLRPEHDGDACTHALSLAIEKALKLKGNAGSKRQHVHGCSVVQARKLY 360
           ALPYLY+PCSE+ L      D  T ALSL +EKALKLKGNA SKRQH+H C +V+A+K Y
Sbjct: 66  ALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVRAKKFY 125

Query: 361 GYKSSEEFFVKIFL-YYPQDVSRAANLLVGGAILDKVLQPHESHVPFLLQFLIDHNLYGM 537
           GY S+EE FVKI+L Y+P DV+RAA+LL+ GA+L K LQP+ESH+PF+LQFL+D+NLYGM
Sbjct: 126 GYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGM 185

Query: 538 GHLHVSRMMFRIPVPD-----------------GSWSKAKVDSSGNACLGLPLWTSLTIP 666
           GH+H+S+M FR PVP                     +  K +SS  A +  P+W+  TIP
Sbjct: 186 GHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSFPVWSLSTIP 245

Query: 667 DGWIWQQSSQLDPPI 711
             W+W  S + D P+
Sbjct: 246 GQWMWNLSEESDTPL 260


Top