BLASTX nr result

ID: Angelica23_contig00020797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020797
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   107   1e-21
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    93   3e-17
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162...    91   1e-16

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  107 bits (266), Expect = 1e-21
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
 Frame = +2

Query: 65  GFGYDEVNDDYKVVKIAQCYS---RFRGIMAIVYSLKTNAWTRIRKVPINIHFTGNRGVF 235
           GFGYD V DDYK+V+IAQ      R       VYSL+  +W RI  +P  +H+ G  GVF
Sbjct: 150 GFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVF 209

Query: 236 ASGSLHWTAIKNP-INAKEIIVGFDLVNQRFVEVPFPVIKGTHLNFSSRTLDAVGGNLCI 412
           A+G+LHW   +NP  N   I+V  DL  + + EV  P  K  +       L  + G LC 
Sbjct: 210 ANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYID---LGVLRGCLCF 266

Query: 413 LDYYPSSRMDVWLMKNFGVPRTWYKALSVKQ 505
           L  +   R+DVW+MK +GV  +W K  SV Q
Sbjct: 267 LANFLGERVDVWMMKEYGVKESWTKLFSVAQ 297


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
 Frame = +2

Query: 65  GFGYDEVNDDYKVVKIAQCYSRFRG---------IMAIVYSLKTNAWTRIRKVPINI--- 208
           GFGYD   DDYKVV++AQ      G             VYSLK + W +I  +PI +   
Sbjct: 141 GFGYDSYGDDYKVVRMAQFVREDGGGDGGGLGCEYEVKVYSLKNDKWKKIEGLPIRLRLL 200

Query: 209 -----HFTGNRG--VFASGSLHWTAI-KNPINAKEIIVGFDLVNQRFVEVPFPVIKGTHL 364
                H    RG  VFA  +LHW    +  +  ++ ++GFD+ + +F E+P P  +   +
Sbjct: 201 SKPFFHILNRRGYGVFAGHALHWIVPQRRELGIRDCVLGFDIRDDKFFELPQPDYENKGM 260

Query: 365 NFSSRTLDAVGGNLCILDYYPSSRMDVWLMKNFGVPRTWYKALSV 499
           NF    +  + GNLC++  Y    +DVW+MK +GV  +W K  SV
Sbjct: 261 NFHV-DVGVLEGNLCVMCNYEHVCVDVWVMKEYGVKESWCKMFSV 304


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
 Frame = +2

Query: 65  GFGYDEVNDDYKVVKIAQCYSRFRGI-------MAIVYSLKTNAWTRIRKVPINIHFTGN 223
           GFGYD  NDDYK+V+IAQ    F G+          V+SL+ N+W RI  +P  + + G 
Sbjct: 143 GFGYDLSNDDYKLVRIAQ----FGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGE 198

Query: 224 RGVFASGSLHWTAIKNP-INAKEIIVGFDLVNQRFVEVPFPVIKGTHLNFSSRTLDAVGG 400
            G++A+G+LHW   ++P     + IV  DL  + +  VP P     + N     L    G
Sbjct: 199 NGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNCNMGVGVLQ---G 255

Query: 401 NLCILDYYPSSRMDVWLMKNFGVPRTWYKALSV 499
            L +L Y  S R+DVW+M+ + V  +W K  SV
Sbjct: 256 CLSLLAYARSERVDVWVMEEYMVKESWSKLFSV 288


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 28/174 (16%)
 Frame = +2

Query: 65  GFGYDEVNDDYKVVKIAQCYSRFRG-----------------IMAIVYSLKTNAWTRIRK 193
           GFGYD V DDYKVV++AQ      G                     VYSLK + W +I  
Sbjct: 141 GFGYDSVGDDYKVVRMAQFVREDEGGGGGGGYGDGGGGLGCEYEVRVYSLKNDKWKKIED 200

Query: 194 VPINIHFTGNR----------GVFASGSLHWTAI-KNPINAKEIIVGFDLVNQRFVEVPF 340
           +PI +     +          GVFA  +LHW    +  +  ++ ++GFD+ N +F E+P 
Sbjct: 201 LPICLKLLSKQFFHVLHRRGYGVFAGHALHWIIPQRRQLGIRDCVLGFDIRNDKFFELPQ 260

Query: 341 PVIKGTHLNFSSRTLDAVGGNLCILDYYPSSRMDVWLMKNFGVPRTWYKALSVK 502
           P  +   ++F    +  + GNLC++  Y    +DVW+M+ +G+  +W K  SV+
Sbjct: 261 PNYESKGMSFQV-DVGVLEGNLCVMCNYEYVCVDVWVMREYGMKESWCKMFSVQ 313


>ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162697|gb|ABD28492.1|
           Cyclin-like F-box; F-box protein interaction domain;
           Galactose oxidase, central [Medicago truncatula]
           gi|355483236|gb|AES64439.1| F-box protein [Medicago
           truncatula]
          Length = 424

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
 Frame = +2

Query: 65  GFGYDEVNDDYKVVKIAQCYSR---FRGIMAIVYSLKTNAWTRIRKVPINIHFTGNRGVF 235
           GFG+D    DYK+++I   ++R   F      ++SLKTN+W  I  +P  + +    GVF
Sbjct: 168 GFGFDPFTADYKLLRITWLFARQNIFYDSHVSLFSLKTNSWKTIPSMPYALQYVQAMGVF 227

Query: 236 ASGSLHWTAIKNPINAKE-IIVGFDLVNQRFVEVPFPV-IKGTHLNFSSR-----TLDAV 394
              SLHW   K    +   +IV F+L  + F EVP PV ++G  +N +S       +  +
Sbjct: 228 VQNSLHWVMAKKLDGSYPWLIVAFNLTLEIFNEVPLPVELEGEEVNSNSNGSFKIRVAVL 287

Query: 395 GGNLCILDYYPSSRMDVWLMKNFGVPRTWYKALSV 499
           GG LC+   Y ++++DVW+MK++G   +W K  ++
Sbjct: 288 GGCLCMSVNYEATKIDVWVMKDYGSRDSWCKLFTL 322


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