BLASTX nr result

ID: Angelica23_contig00020796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020796
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...   108   1e-21
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   106   3e-21
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   103   3e-20
gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]   103   3e-20

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  108 bits (269), Expect = 1e-21
 Identities = 76/231 (32%), Positives = 115/231 (49%), Gaps = 22/231 (9%)
 Frame = +1

Query: 1   FRCVSKGWCSLIDSNAFIKKHLKITLECNIGGGLIINAGSDKFYLVDFDSLDDPSASVVR 180
           FRCVSK WC  IDS  FI  HLK + + +    LI+   ++    VD DS D    S+  
Sbjct: 23  FRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATN-LCTVDLDSPD--FTSIEL 79

Query: 181 INDPIKTLLVDSQFVGASNGLICVFKNEMNDVFLFNPTTRKSRKI----ANXXXXXXXXX 348
            N+P+K+    ++ +G+ NGL+ +  ++ + + L+NP+TR+ + I               
Sbjct: 80  KNNPLKSDDCATEVMGSCNGLLALLNSDFS-IALYNPSTREKKMIPVSPLELPNDLDDSK 138

Query: 349 XXXXXXMCGFGYDEVNDDYKVVKIAECYSK----FRGIMAIVYSLKTNAWTRIHNVP-DV 513
                   GFG+D +N+DYKVV+    Y      F      VYSLK+N+W RI + P D+
Sbjct: 139 VSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDL 198

Query: 514 RF----------TSNRGIFASGSLHWTAI---RSPTNCKDLIVGFDLELQQ 627
           RF              G+FA+ ++HW A    +   N  DLIV FDL  ++
Sbjct: 199 RFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEE 249


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score =  108 bits (269), Expect = 1e-21
 Identities = 72/212 (33%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
 Frame = +1

Query: 1   FRCVSKGWCSLIDSNAFIKKHLKITLECN--IGGGLIINAGSDKFYLVDFDSL---DDPS 165
           F CVSK W  LI S AF+KKH+K+T      I   LI    ++ F       L       
Sbjct: 31  FMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYHRLIFRNTNNDFKFCPLPPLFTNQQLI 90

Query: 166 ASVVRINDPIKTLLVDSQFVGASNGLICVFKNEMNDVFLFNPTTRKSRKIANXXXXXXXX 345
             ++ I+ PI+   + +  VG+ NGLICV      + +++NP   KS+++          
Sbjct: 91  EEILHIDSPIERTTLSTHIVGSVNGLICVAHVRQREAYIWNPAITKSKELPK-----STS 145

Query: 346 XXXXXXXMCGFGYDEVNDDYKVVKIAECYSKFRGIMAIVYSLKTNAWTRIHNVPDVRFTS 525
                   CGFGYDE  DDYKVV I          +  +YSL+TN+WT +H+     F  
Sbjct: 146 NLCSDGIKCGFGYDESRDDYKVVFIDYPIRHNHRTVVNIYSLRTNSWTTLHDQLQGIFLL 205

Query: 526 N-RGIFASGSLHWTAIRSPTNCKDL-IVGFDL 615
           N  G F +G L+WT+     N K   I  FDL
Sbjct: 206 NLHGRFVNGKLYWTSSTCINNYKVCNITSFDL 237


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  106 bits (265), Expect = 3e-21
 Identities = 70/217 (32%), Positives = 117/217 (53%), Gaps = 10/217 (4%)
 Frame = +1

Query: 4   RCVSKGWCSLIDSNAFIKKHLKITLECNIGGGLIINAGSDKFYLVDFDS---LDDPSASV 174
           R VSK WC+LID   F+K HLK +++ +    +I+   S   Y+ DF+    L+D   ++
Sbjct: 25  RSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHYM-DFEQNLVLND-CVTL 82

Query: 175 VRINDPIKTLLVDSQFVGASNGLICVFKNEMNDVFLFNPTTRKSRKI--ANXXXXXXXXX 348
             +N P+       + +G+ NGL+C+  N ++D+ ++NP+TRK R +             
Sbjct: 83  KELNHPLMCYNHGIKVLGSVNGLLCI-SNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGT 141

Query: 349 XXXXXXMCGFGYDEVNDDYKVVKIAECYSKFRGIM---AIVYSLKTNAWTRIHNVP-DVR 516
                 + GFGYD V DDYK+V+IA+     +        VYSL+  +W RI ++P  V 
Sbjct: 142 KSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVH 201

Query: 517 FTSNRGIFASGSLHWTAIRSP-TNCKDLIVGFDLELQ 624
           +    G+FA+G+LHW    +P +N  +++V  DL ++
Sbjct: 202 YPGANGVFANGALHWVVGENPESNVANIVVALDLGVE 238


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  103 bits (257), Expect = 3e-20
 Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 13/220 (5%)
 Frame = +1

Query: 4   RCVSKGWCSLIDSNAFIKKHLKITLE--CNIGGGLIINAGSDKFYLVDFDSLDDPSASVV 177
           RCVSK W +LIDS  FI  HL  ++E  CN    L I   S + Y + FD LD    ++ 
Sbjct: 25  RCVSKRWRTLIDSPTFIYLHLNHSIESPCN----LSIILKSSELYSLSFDLLD----NIQ 76

Query: 178 RINDPIKTLLVDSQFVGASNGLICVFKNEMNDVFLFNPTTRKSRKIANXXXXXXXXXXXX 357
            ++ P+       + +G+ NGL+C+  N ++D+ L+NP+ R  R +              
Sbjct: 77  PLDHPLMCYNHGVKILGSCNGLLCIC-NIVDDIALWNPSIRAHRVVPYLPVELKRYFGMC 135

Query: 358 XXXMC--GFGYDEVNDDYKVVKIAECYSKFRGI-------MAIVYSLKTNAWTRIHNVP- 507
              +   GFGYD  NDDYK+V+IA+    F G+          V+SL+ N+W RI ++P 
Sbjct: 136 SCRVSVFGFGYDLSNDDYKLVRIAQ----FGGVDRKSFESEVKVFSLRKNSWRRIADMPY 191

Query: 508 DVRFTSNRGIFASGSLHWTAIRSP-TNCKDLIVGFDLELQ 624
            V +    GI+A+G+LHW   + P +   D IV  DL ++
Sbjct: 192 CVLYPGENGIYANGALHWLVSQDPDSTVADTIVALDLGVE 231


>gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 327

 Score =  103 bits (257), Expect = 3e-20
 Identities = 71/213 (33%), Positives = 99/213 (46%), Gaps = 8/213 (3%)
 Frame = +1

Query: 1   FRCVSKGWCSLIDSNAFIKKHLKITLECN--IGGGLIINAGSDKFYLVDFDSL---DDPS 165
           F CVSK W  LI S AF+K H+K+T +    I   LI    +D F       L       
Sbjct: 32  FMCVSKSWLQLISSPAFVKNHIKLTADDKGYIYHRLIFRNTNDDFKFCPLPPLFTQQQLI 91

Query: 166 ASVVRINDPIKTLLVDSQFVGASNGLICVFKNEMNDVFLFNPTTRKSRKIANXXXXXXXX 345
             +  I+ PI+   + +  VG+ NGLIC       + +++NPT  KS+++          
Sbjct: 92  KELYHIDSPIERTTLSTHIVGSVNGLICAAHVRQREAYIWNPTITKSKELPK-----SRS 146

Query: 346 XXXXXXXMCGFGYDEVNDDYKVVKIAECYSKFRGIMAI-VYSLKTNAWTRIHNVPDVRFT 522
                   CGFGYDE  DDYKVV I     +      + +YSL+T +WT +H+     F 
Sbjct: 147 NLCSDGIKCGFGYDESRDDYKVVFIDYPIHRHNHRTVVNIYSLRTKSWTTLHDQLQGFFL 206

Query: 523 SN-RGIFASGSLHWTAIRSPTNCKDL-IVGFDL 615
            N  G F +G L+WT+     N K   I  FDL
Sbjct: 207 LNLHGRFVNGKLYWTSSSCINNYKVCNITSFDL 239


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