BLASTX nr result

ID: Angelica23_contig00020784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020784
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   150   2e-34
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   132   9e-29
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...   131   1e-28
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209...   128   1e-27
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   128   1e-27

>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  150 bits (380), Expect = 2e-34
 Identities = 75/122 (61%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
 Frame = -3

Query: 639 DVKAFYRQKK-NTGGITXXXXXXXXXXXXSLTKHAPTFGSDVVQPPALVTHGGALDLKDD 463
           D+K+FYRQKK N  GIT               KHA   GS++ QP AL++HGGALDL+DD
Sbjct: 8   DMKSFYRQKKTNKTGITKSSSKSKKKSPP---KHAAAIGSNITQPTALISHGGALDLQDD 64

Query: 462 YDGSEEVLRQFDMNMAYGPCIGMSRVARWERAGKLGLNPPGDVGQLLRTGKVGGESLWDG 283
           YD +EEVLRQFDMNMAYGPC+GM+RV RWERA +LGLNPP  +  LL+ GKV  E LWDG
Sbjct: 65  YDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLLKGGKVNSECLWDG 124

Query: 282 RV 277
           RV
Sbjct: 125 RV 126


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  132 bits (331), Expect = 9e-29
 Identities = 66/123 (53%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = -3

Query: 639 DVKAFYRQKKN--TGGITXXXXXXXXXXXXSLTKHAPTFGSDVVQPPALVTHGGALDLKD 466
           ++K FY+Q K+  TGGI+               KHA   GSDV+QP AL++HG +LDL +
Sbjct: 5   NLKGFYKQTKSNITGGISKSKPSSRKVTP----KHAAAQGSDVIQPAALISHG-SLDLNE 59

Query: 465 DYDGSEEVLRQFDMNMAYGPCIGMSRVARWERAGKLGLNPPGDVGQLLRTGKVGGESLWD 286
           DYD  EE+LRQFDMN+AYGPC+GM+R+ RWERA +LG+NPP ++ +LL+TGKV  + LW 
Sbjct: 60  DYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLWQ 119

Query: 285 GRV 277
           GRV
Sbjct: 120 GRV 122


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  131 bits (330), Expect = 1e-28
 Identities = 68/120 (56%), Positives = 79/120 (65%)
 Frame = -3

Query: 642 TDVKAFYRQKKNTGGITXXXXXXXXXXXXSLTKHAPTFGSDVVQPPALVTHGGALDLKDD 463
           + +K FYRQKKN  GI                 HA T GSD+ QP ALV+H    DLKDD
Sbjct: 6   SSMKGFYRQKKNKSGIRKPTSTSKSSLI-----HAATLGSDITQPTALVSHDSP-DLKDD 59

Query: 462 YDGSEEVLRQFDMNMAYGPCIGMSRVARWERAGKLGLNPPGDVGQLLRTGKVGGESLWDG 283
           YD  E+VLRQFDMN AYGPC+GMSR+ARWERA +LGLNPP ++  LL+  KV  E LWDG
Sbjct: 60  YDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSECLWDG 119


>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
           gi|449523375|ref|XP_004168699.1| PREDICTED:
           uncharacterized protein LOC101228956 [Cucumis sativus]
          Length = 125

 Score =  128 bits (322), Expect = 1e-27
 Identities = 66/120 (55%), Positives = 83/120 (69%)
 Frame = -3

Query: 636 VKAFYRQKKNTGGITXXXXXXXXXXXXSLTKHAPTFGSDVVQPPALVTHGGALDLKDDYD 457
           +K FY+Q+K++G I+                ++ + GSD VQP ALV+HG +LDL+DDY 
Sbjct: 8   LKDFYKQRKSSG-ISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHG-SLDLQDDYG 65

Query: 456 GSEEVLRQFDMNMAYGPCIGMSRVARWERAGKLGLNPPGDVGQLLRTGKVGGESLWDGRV 277
            SE  LRQFDMN AYGPC+GM+R+ARWERA  LGLNPP D+G LL+ GKV  E LWD RV
Sbjct: 66  VSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWDSRV 125


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  128 bits (322), Expect = 1e-27
 Identities = 64/123 (52%), Positives = 86/123 (69%), Gaps = 2/123 (1%)
 Frame = -3

Query: 639 DVKAFYRQKKN--TGGITXXXXXXXXXXXXSLTKHAPTFGSDVVQPPALVTHGGALDLKD 466
           ++K FY+Q K+  TGGI+               KHA   GSDV QP AL++HG ++DL +
Sbjct: 7   NLKGFYKQTKSNITGGISKSKPSSRKVAP----KHAAAQGSDVTQPAALISHG-SVDLNE 61

Query: 465 DYDGSEEVLRQFDMNMAYGPCIGMSRVARWERAGKLGLNPPGDVGQLLRTGKVGGESLWD 286
           DYD  EE+LRQFDMN+ YGPC+GM+R+ RWERA +LG+NPP ++ +LL+TGKV  + LW 
Sbjct: 62  DYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCLWQ 121

Query: 285 GRV 277
           GRV
Sbjct: 122 GRV 124


Top