BLASTX nr result

ID: Angelica23_contig00020737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020737
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like prote...   177   2e-42
dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]    177   2e-42
ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...   176   5e-42
ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group] g...   176   5e-42

>ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|222842648|gb|EEE80195.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score =  177 bits (449), Expect = 2e-42
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = +3

Query: 114 AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE 293
           AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE
Sbjct: 8   AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE 67

Query: 294 EIVRATRRTVPFLFVRGDGVILVSPPLRTA 383
           EIVRATRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 68  EIVRATRRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
           [Brachypodium distachyon]
          Length = 98

 Score =  177 bits (448), Expect = 2e-42
 Identities = 89/91 (97%), Positives = 90/91 (98%)
 Frame = +3

Query: 111 IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 290
           IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 8   IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 67

Query: 291 EEIVRATRRTVPFLFVRGDGVILVSPPLRTA 383
           EEIVR TRRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 68  EEIVRTTRRTIPFLFVRGDGVILVSPPLRTA 98


>dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 121

 Score =  177 bits (448), Expect = 2e-42
 Identities = 89/91 (97%), Positives = 90/91 (98%)
 Frame = +3

Query: 111 IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 290
           IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 31  IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 90

Query: 291 EEIVRATRRTVPFLFVRGDGVILVSPPLRTA 383
           EEIVR TRRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 91  EEIVRTTRRTIPFLFVRGDGVILVSPPLRTA 121


>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score =  176 bits (445), Expect = 5e-42
 Identities = 89/90 (98%), Positives = 89/90 (98%)
 Frame = +3

Query: 114 AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE 293
           AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE
Sbjct: 8   AVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE 67

Query: 294 EIVRATRRTVPFLFVRGDGVILVSPPLRTA 383
           EIVR TRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 68  EIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97


>ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group]
           gi|56785201|dbj|BAD81919.1| small nuclear
           ribonucleoprotein-like [Oryza sativa Japonica Group]
           gi|113534440|dbj|BAF06823.1| Os01g0866700 [Oryza sativa
           Japonica Group] gi|125528497|gb|EAY76611.1| hypothetical
           protein OsI_04561 [Oryza sativa Indica Group]
           gi|125572761|gb|EAZ14276.1| hypothetical protein
           OsJ_04201 [Oryza sativa Japonica Group]
           gi|215708805|dbj|BAG94074.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765758|dbj|BAG87455.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 104

 Score =  176 bits (445), Expect = 5e-42
 Identities = 88/91 (96%), Positives = 90/91 (98%)
 Frame = +3

Query: 111 IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 290
           IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 14  IAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 73

Query: 291 EEIVRATRRTVPFLFVRGDGVILVSPPLRTA 383
           EEIVR T+RT+PFLFVRGDGVILVSPPLRTA
Sbjct: 74  EEIVRTTKRTIPFLFVRGDGVILVSPPLRTA 104


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