BLASTX nr result

ID: Angelica23_contig00020731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020731
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530366.1| Transmembrane and coiled-coil domains protei...    58   9e-07
ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil dom...    58   9e-07
gb|AFW90618.1| transmembrane and coiled-coil domains protein [So...    57   2e-06
gb|AAQ84318.1| fiber protein Fb27 [Gossypium barbadense]               56   3e-06
gb|AAY43795.1| Fb27 [Gossypium hirsutum]                               55   4e-06

>ref|XP_002530366.1| Transmembrane and coiled-coil domains protein, putative [Ricinus
           communis] gi|223530113|gb|EEF32027.1| Transmembrane and
           coiled-coil domains protein, putative [Ricinus communis]
          Length = 192

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -3

Query: 364 KFLGFSPPRGAAGAGLFPMPDPKTN 290
           KFLGFSPPRGAAGAGLFPMPDPKTN
Sbjct: 168 KFLGFSPPRGAAGAGLFPMPDPKTN 192


>ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil domains protein 1 [Vitis
           vinifera] gi|297739810|emb|CBI29992.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -3

Query: 364 KFLGFSPPRGAAGAGLFPMPDPKTN 290
           KFLGFSPPRGAAGAGLFPMPDPKTN
Sbjct: 169 KFLGFSPPRGAAGAGLFPMPDPKTN 193


>gb|AFW90618.1| transmembrane and coiled-coil domains protein [Solanum tuberosum]
          Length = 194

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -3

Query: 364 KFLGFSPPRGAAGAGLFPMPDPKTN 290
           KFLGFSPPRG+AGAGLFPMPDPKTN
Sbjct: 170 KFLGFSPPRGSAGAGLFPMPDPKTN 194


>gb|AAQ84318.1| fiber protein Fb27 [Gossypium barbadense]
          Length = 194

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -3

Query: 364 KFLGFSPPRGAAGAGLFPMPDPKTN 290
           KFLGFSPPRGAAGAGLFP+PDPKTN
Sbjct: 170 KFLGFSPPRGAAGAGLFPIPDPKTN 194


>gb|AAY43795.1| Fb27 [Gossypium hirsutum]
          Length = 194

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -3

Query: 364 KFLGFSPPRGAAGAGLFPMPDPKT 293
           KFLGFSPPRGAAGAGLFPMPDPKT
Sbjct: 170 KFLGFSPPRGAAGAGLFPMPDPKT 193


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