BLASTX nr result

ID: Angelica23_contig00020684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020684
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   224   1e-56
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        211   1e-52
ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512...   209   3e-52
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   207   1e-51
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        206   3e-51

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  224 bits (571), Expect = 1e-56
 Identities = 111/138 (80%), Positives = 124/138 (89%)
 Frame = -1

Query: 414 PPVGSLNLVSDSSWDFHSDRFLPFLTDNTDFTXXXXXXXXXXGKSTILNELYGFDGTSPG 235
           PP+GSLNL+SDS W+FH+DRFLPFLTDNTDFT          GKSTI+NELYGFDG+SPG
Sbjct: 63  PPIGSLNLLSDS-WEFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPG 121

Query: 234 MLPPFAIESEETRASARHCTVGIEPRISNERIILLDTQPVFSPSVLAEMIRPDGSSTISI 55
           MLPPFAI+SE+ RA ARHCTVGIEPRIS ER+ILLDTQPVFSPSVLAEM+RPDGSSTIS+
Sbjct: 122 MLPPFAIQSEDIRAMARHCTVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISV 181

Query: 54  LGGESLSAELAHDLMGIQ 1
           LGGESLS+ELAH+LMGIQ
Sbjct: 182 LGGESLSSELAHELMGIQ 199


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  211 bits (536), Expect = 1e-52
 Identities = 107/138 (77%), Positives = 118/138 (85%)
 Frame = -1

Query: 414 PPVGSLNLVSDSSWDFHSDRFLPFLTDNTDFTXXXXXXXXXXGKSTILNELYGFDGTSPG 235
           P V SLNL+SDS WDFH DRFLPFLT+NTDFT          GKSTI+NELYGFD +SPG
Sbjct: 45  PSVASLNLLSDS-WDFHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPG 103

Query: 234 MLPPFAIESEETRASARHCTVGIEPRISNERIILLDTQPVFSPSVLAEMIRPDGSSTISI 55
           MLPPFAI+SEETRA ARHC+ GIEPRIS ERIILLDTQPVFS SVLAEM+RPDGSSTIS+
Sbjct: 104 MLPPFAIQSEETRAMARHCSTGIEPRISTERIILLDTQPVFSASVLAEMMRPDGSSTISV 163

Query: 54  LGGESLSAELAHDLMGIQ 1
           L GE+LSAELAH+L+GIQ
Sbjct: 164 LSGETLSAELAHELIGIQ 181


>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
           Protein SMG9 [Medicago truncatula]
          Length = 396

 Score =  209 bits (533), Expect = 3e-52
 Identities = 108/138 (78%), Positives = 115/138 (83%)
 Frame = -1

Query: 414 PPVGSLNLVSDSSWDFHSDRFLPFLTDNTDFTXXXXXXXXXXGKSTILNELYGFDGTSPG 235
           P V SLNL+SDS WDFH DRFLPFLT+NTDFT          GKS+I+NELYGFD TSPG
Sbjct: 47  PSVASLNLLSDS-WDFHFDRFLPFLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPG 105

Query: 234 MLPPFAIESEETRASARHCTVGIEPRISNERIILLDTQPVFSPSVLAEMIRPDGSSTISI 55
           MLPPF I+SEE RA ARHC+ GIEPRIS ERIILLDTQPVFS SVLAEM RPDGSSTIS+
Sbjct: 106 MLPPFTIQSEENRAMARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISL 165

Query: 54  LGGESLSAELAHDLMGIQ 1
           L GESLSAELAHDLMGIQ
Sbjct: 166 LNGESLSAELAHDLMGIQ 183


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  207 bits (528), Expect = 1e-51
 Identities = 104/138 (75%), Positives = 116/138 (84%)
 Frame = -1

Query: 414 PPVGSLNLVSDSSWDFHSDRFLPFLTDNTDFTXXXXXXXXXXGKSTILNELYGFDGTSPG 235
           P + SLNL+SDS WDFH DRFLPFLT+NTDFT          GKSTILNELYGFDGTSPG
Sbjct: 53  PSITSLNLLSDS-WDFHIDRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYGFDGTSPG 111

Query: 234 MLPPFAIESEETRASARHCTVGIEPRISNERIILLDTQPVFSPSVLAEMIRPDGSSTISI 55
           MLPPF ++SE+ RA ARHC+VGIEPRIS ER+ILLDTQPVFSPSVLAEM+RPDGSSTIS+
Sbjct: 112 MLPPFTVQSEDNRAMARHCSVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISV 171

Query: 54  LGGESLSAELAHDLMGIQ 1
           L GE+LS ELAH+L  IQ
Sbjct: 172 LSGENLSTELAHELTAIQ 189


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  206 bits (524), Expect = 3e-51
 Identities = 104/138 (75%), Positives = 116/138 (84%)
 Frame = -1

Query: 414 PPVGSLNLVSDSSWDFHSDRFLPFLTDNTDFTXXXXXXXXXXGKSTILNELYGFDGTSPG 235
           P   SLNL+SDS WDF  DRFLPFLT+NTDFT          GKSTI+NE+YGFD TSPG
Sbjct: 45  PSAASLNLLSDS-WDFRIDRFLPFLTENTDFTVIGVIGSPGVGKSTIMNEIYGFDSTSPG 103

Query: 234 MLPPFAIESEETRASARHCTVGIEPRISNERIILLDTQPVFSPSVLAEMIRPDGSSTISI 55
           MLPPFAI+SEETRA ARHC+ GIEPRIS ERIILLDTQPVFS SVL+EM+RPDGSSTIS+
Sbjct: 104 MLPPFAIQSEETRAMARHCSTGIEPRISTERIILLDTQPVFSASVLSEMMRPDGSSTISV 163

Query: 54  LGGESLSAELAHDLMGIQ 1
           L GE+LSAELAH+L+GIQ
Sbjct: 164 LSGETLSAELAHELLGIQ 181


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