BLASTX nr result

ID: Angelica23_contig00020540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020540
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...   194   6e-48
emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]   194   6e-48
ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communi...   187   6e-46
ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
ref|XP_002881542.1| WD-40 repeat family protein [Arabidopsis lyr...   175   4e-42

>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score =  194 bits (493), Expect = 6e-48
 Identities = 99/173 (57%), Positives = 127/173 (73%), Gaps = 6/173 (3%)
 Frame = +2

Query: 5   NQLGSFFLIKNLDTGTEFIVKEYNDKGLWNKVSDLHTGKQLTLEEFEKSVGHSPVVKELM 184
           ++ G+FFLIKNLDTG EFIVKE+++ G+WN++SDL TGKQLT+EEFEKSVG+SPVVKELM
Sbjct: 244 SRFGAFFLIKNLDTGKEFIVKEFDEDGMWNRLSDLQTGKQLTMEEFEKSVGYSPVVKELM 303

Query: 185 HRTSLEKNPD------EDKKVAADSTFSKGFRNSKRKGAAIFKNIMGVANSVSVFMGDXX 346
            R ++ +  D       ++K + +S  +K FR SKR+G A+ KNI GVANS   F+ +  
Sbjct: 304 RRQNVVRITDGIGIGGSERKPSMNSYITKSFRFSKRRGVALLKNIKGVANS---FISE-R 359

Query: 347 XXXXXXXXXXXXNKNSSSQWVKVRQHGRQYKEFTGLHLCQEIQAHEGSIWTIK 505
                       +KNSSS+W+KVRQHG+ YKE T LHLCQEIQAHEGSIWTI+
Sbjct: 360 EREIPSLQEAKSSKNSSSEWIKVRQHGKSYKELTALHLCQEIQAHEGSIWTIR 412


>emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]
          Length = 1068

 Score =  194 bits (493), Expect = 6e-48
 Identities = 99/173 (57%), Positives = 127/173 (73%), Gaps = 6/173 (3%)
 Frame = +2

Query: 5   NQLGSFFLIKNLDTGTEFIVKEYNDKGLWNKVSDLHTGKQLTLEEFEKSVGHSPVVKELM 184
           ++ G+FFLIKNLDTG EFIVKE+++ G+WN++SDL TGKQLT+EEFEKSVG+SPVVKELM
Sbjct: 202 SRFGAFFLIKNLDTGKEFIVKEFDEDGMWNRLSDLQTGKQLTMEEFEKSVGYSPVVKELM 261

Query: 185 HRTSLEKNPD------EDKKVAADSTFSKGFRNSKRKGAAIFKNIMGVANSVSVFMGDXX 346
            R ++ +  D       ++K + +S  +K FR SKR+G A+ KNI GVANS   F+ +  
Sbjct: 262 RRQNVVRITDGIGIGGSERKPSMNSYITKSFRFSKRRGVALLKNIKGVANS---FISE-R 317

Query: 347 XXXXXXXXXXXXNKNSSSQWVKVRQHGRQYKEFTGLHLCQEIQAHEGSIWTIK 505
                       +KNSSS+W+KVRQHG+ YKE T LHLCQEIQAHEGSIWTI+
Sbjct: 318 EREIPSLQEAKSSKNSSSEWIKVRQHGKSYKELTALHLCQEIQAHEGSIWTIR 370


>ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communis]
           gi|223532862|gb|EEF34634.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 939

 Score =  187 bits (476), Expect = 6e-46
 Identities = 97/176 (55%), Positives = 122/176 (69%), Gaps = 9/176 (5%)
 Frame = +2

Query: 5   NQLGSFFLIKNLDTGTEFIVKEYNDKGLWNKVSDLHTGKQLTLEEFEKSVGHSPVVKELM 184
           N+ G+FFLIKNLDTG EF+V EY+  G+WN+VSDL TGKQLT+EEFEK VGHSPVVKELM
Sbjct: 240 NRFGAFFLIKNLDTGKEFVVNEYDQDGMWNRVSDLQTGKQLTMEEFEKCVGHSPVVKELM 299

Query: 185 HRTSLEK----NPDEDKKVAADSTFSKGFRNSKRKGAAIFKNIMGVANSVSV--FMG--- 337
            R ++ +       +D+K+  +S  SK  R SKR+GAA+ KNI GVA+S+S+    G   
Sbjct: 300 RRENVSRMNGEEMSDDRKINTNSYLSKSLRLSKRRGAALLKNIKGVAHSMSITGLRGADK 359

Query: 338 DXXXXXXXXXXXXXXNKNSSSQWVKVRQHGRQYKEFTGLHLCQEIQAHEGSIWTIK 505
           +                +SSS W+KVRQ G+ YKE + LHLCQEIQAH+GSIWTIK
Sbjct: 360 ERESHSPTAESKAGAKNSSSSGWMKVRQAGKSYKELSALHLCQEIQAHQGSIWTIK 415


>ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|222855029|gb|EEE92576.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/172 (55%), Positives = 121/172 (70%), Gaps = 4/172 (2%)
 Frame = +2

Query: 2   DNQLGSFFLIKNLDTGTEFIVKEYNDKGLWNKVSDLHTGKQLTLEEFEKSVGHSPVVKEL 181
           +++ G+FFLIKNLDTG EFIV EY+  G+WN++SDL TGKQLT+EEFEK VGHSPVVKEL
Sbjct: 248 NSRFGAFFLIKNLDTGKEFIVNEYDQDGMWNRLSDLQTGKQLTMEEFEKCVGHSPVVKEL 307

Query: 182 MHRTSLEK----NPDEDKKVAADSTFSKGFRNSKRKGAAIFKNIMGVANSVSVFMGDXXX 349
           M R ++ +    +   D+K++A+S  SK  R SKR+GAA+ KNI GVA S+S  M     
Sbjct: 308 MRRENVSRLNVTDEGNDRKISANSYLSKSLRMSKRRGAALLKNIKGVAYSMS--MSGSSR 365

Query: 350 XXXXXXXXXXXNKNSSSQWVKVRQHGRQYKEFTGLHLCQEIQAHEGSIWTIK 505
                        ++SS W+KVRQ G+ YKE + LHLCQEIQAH GSIWTI+
Sbjct: 366 IQDPKQEPKLSKNSASSGWIKVRQTGKSYKELSALHLCQEIQAHRGSIWTIR 417


>ref|XP_002881542.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327381|gb|EFH57801.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 911

 Score =  175 bits (443), Expect = 4e-42
 Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 6/172 (3%)
 Frame = +2

Query: 8   QLGSFFLIKNLDTGTEFIVKEYNDKGLWNKVSDLHTGKQLTLEEFEKSVGHSPVVKELMH 187
           +LG+FFLIKNLDTG EFIV EY++ G+WN++SDL TGKQLTLEEFEK VG+SPVVKELM 
Sbjct: 249 RLGAFFLIKNLDTGKEFIVNEYDEDGMWNRLSDLQTGKQLTLEEFEKCVGYSPVVKELMR 308

Query: 188 RTSLEK---NPDEDKKVAADSTFSKGFRNSKRKGAAIFKNIMGVANSVSVFMGDXXXXXX 358
           R ++ +    P  D +   +S  SK  R SKR+GAA+ KNI GVA+S+S+ + D      
Sbjct: 309 RENVNRINYEPLMDLR-KFNSYLSKSVRLSKRRGAALLKNIKGVAHSMSLRVADKDVSDG 367

Query: 359 XXXXXXXXNKN---SSSQWVKVRQHGRQYKEFTGLHLCQEIQAHEGSIWTIK 505
                     +    +++WVKVR  G+ YKE + LH+CQEIQAHEG++WTIK
Sbjct: 368 STDSPKKGKDHKHGKANEWVKVRPTGKSYKELSALHMCQEIQAHEGAVWTIK 419


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