BLASTX nr result

ID: Angelica23_contig00020402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020402
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...    79   7e-13
gb|ABK95155.1| unknown [Populus trichocarpa]                           79   7e-13
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]       79   1e-12
ref|XP_003613816.1| RING finger protein [Medicago truncatula] gi...    67   2e-12
ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...    77   4e-12

>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
 Frame = +3

Query: 483 PERSDPHDRIILLNPLTQSVVMIEGSAWRINALLNDLISNKDGPPPASKASIEAMQTVET 662
           P+ +DP++RIIL+NPLTQ +V+IEG+A  + +LL D I NK+G PPASKASIEAM +VE 
Sbjct: 49  PQTTDPNERIILINPLTQGMVVIEGAA-SLESLLRD-IGNKNGQPPASKASIEAMPSVEI 106

Query: 663 KEGD---ECVICME 695
            E +   EC IC+E
Sbjct: 107 GEDNKDGECAICLE 120


>gb|ABK95155.1| unknown [Populus trichocarpa]
          Length = 212

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
 Frame = +3

Query: 483 PERSDPHDRIILLNPLTQSVVMIEGSAWRINALLNDLISNKDGPPPASKASIEAMQTVET 662
           P+ +DP++RIIL+NPLTQ +V+IEG+A  + +LL D I NK+G PPASKASIEAM +VE 
Sbjct: 36  PQTTDPNERIILINPLTQGMVVIEGAA-SLESLLRD-IGNKNGQPPASKASIEAMPSVEI 93

Query: 663 KEGD---ECVICME 695
            E +   EC IC+E
Sbjct: 94  GEDNKDGECAICLE 107


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
 Frame = +3

Query: 483 PERSDPHDRIILLNPLTQSVVMIEGSAWRINALLNDLISNKDGPPPASKASIEAMQTVET 662
           P+ +DP++RIIL+NPLTQ +V+IEG+A  + +LL D+  NK+G PPASKASIEAM +VE 
Sbjct: 49  PQTTDPNERIILINPLTQGMVVIEGAA-SLESLLRDM-GNKNGQPPASKASIEAMPSVEI 106

Query: 663 KEGD---ECVICME 695
            E +   EC IC+E
Sbjct: 107 GEDNKDGECAICLE 120


>ref|XP_003613816.1| RING finger protein [Medicago truncatula]
           gi|355515151|gb|AES96774.1| RING finger protein
           [Medicago truncatula]
          Length = 222

 Score = 67.4 bits (163), Expect(2) = 2e-12
 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = +3

Query: 486 ERSDPHDRIILLNPLTQSVVMIEGSAWRINALLNDL-ISNKDGPPPASKASIEAMQTVET 662
           E S P  RII +NPLTQS+ +I+G++  I  L N+L  S K+G PPA+K SIEAM  +E 
Sbjct: 50  EDSTPQ-RIIFVNPLTQSITVIDGAS-SIEELFNNLGSSTKNGQPPATKESIEAMDKIEI 107

Query: 663 KEGD--ECVICME 695
           +EGD  ECV+C+E
Sbjct: 108 EEGDGGECVVCLE 120



 Score = 30.4 bits (67), Expect(2) = 2e-12
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +2

Query: 263 MASDQTNMPELSLLEQLINSRNRPVSQFSPITLPLTNPQINTNPDQDS 406
           MAS+       SL E++I  RNR +S F P  L L+    N++PD +S
Sbjct: 1   MASEAEISEISSLFERMI--RNRDMSLFLPFMLSLSQTLNNSDPDHES 46


>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
 Frame = +3

Query: 480 SPERSDPHDRIILLNPLTQSVVMIEGSAWRINALLNDLISNKDGPPPASKASIEAMQTVE 659
           +P+ +DP++RIIL+NP TQ +V+IEG+A  + +LL D I NK G PPASKASIEAM  VE
Sbjct: 49  APQTTDPNERIILINPFTQGMVVIEGAA-SLESLLRD-IGNKKGQPPASKASIEAMPKVE 106

Query: 660 TKEGD---ECVICME 695
             E +   EC IC+E
Sbjct: 107 IGEDNKDGECAICLE 121


Top