BLASTX nr result

ID: Angelica23_contig00020324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020324
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group] g...   287   2e-75
ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 ...   280   2e-73
ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...   280   2e-73
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   275   9e-72
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   274   2e-71

>ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group]
            gi|113548492|dbj|BAF11935.1| Os03g0333100 [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  287 bits (734), Expect = 2e-75
 Identities = 156/276 (56%), Positives = 189/276 (68%), Gaps = 13/276 (4%)
 Frame = -3

Query: 810  EEEKYESIRDRFVTGDWSKAXXXXXXXXXXXXXXXXXNASIGDFEDLETGEKHESRV--- 640
            +E+  +SIRDRFVTG+WSKA                 +   GDFEDLETGE H S+    
Sbjct: 631  DEDLIKSIRDRFVTGNWSKAALRGQEINENDVDDEEVD---GDFEDLETGEVHTSKAYEN 687

Query: 639  ---NG-----EDVDAEQRRLKKLELRANFDAQFDGS-VSPEE-DNDTKNEANHHQFIITE 490
               NG     +D+  E+RRLKKL L+A FDA++DGS +S EE DNDTK            
Sbjct: 688  TSGNGGTHKQDDLAMEERRLKKLALKAKFDAEYDGSDLSGEEVDNDTKKSKREETNGGGY 747

Query: 489  AKMVKEEAELIRQMKIKGLNDIDEATLVEMEGYRTGTYLRLEIRDVPCEMVEHFDPCHPX 310
               +KEE E+ +QM I  LND+DE T VE+EG+RTG+Y+RLE+  VP E+VE+FDPCHP 
Sbjct: 748  FDKLKEEIEIRKQMNISELNDLDEDTRVEIEGFRTGSYIRLEVHGVPFELVEYFDPCHPI 807

Query: 309  XXXXXXXXXXXXGYMQILLKRHRWHRKVLKTRDPIIASIG*RRYQTTPIYAIEDQNGRHR 130
                        GYMQ  LKRHRWHRKVLKT+DPII SIG RR+QTTP+YAIED+NGRHR
Sbjct: 808  LVGGIGLGEENTGYMQASLKRHRWHRKVLKTKDPIIVSIGWRRFQTTPVYAIEDRNGRHR 867

Query: 129  MLKYTPKHMHCLAMF*GPLAPPKTGVVAVQNLANSQ 22
            MLKYTP+HMHC AMF GPLAPPK+GV+AVQ+L+NSQ
Sbjct: 868  MLKYTPEHMHCFAMFWGPLAPPKSGVLAVQHLSNSQ 903


>ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Brachypodium
            distachyon]
          Length = 1178

 Score =  280 bits (717), Expect = 2e-73
 Identities = 151/274 (55%), Positives = 188/274 (68%), Gaps = 11/274 (4%)
 Frame = -3

Query: 810  EEEKYESIRDRFVTGDWSKAXXXXXXXXXXXXXXXXXNASIGDFEDLETGEKHESRV--N 637
            +E+  +SIRDRFVTGDWSKA                 +   GDFEDLETGE H+S+   N
Sbjct: 633  DEDLAKSIRDRFVTGDWSKASLRGREIDENGEGDEEID---GDFEDLETGEVHKSQAAEN 689

Query: 636  G-------EDVDAEQRRLKKLELRANFDAQFDGS-VSPEE-DNDTKNEANHHQFIITEAK 484
            G       +++  E+ RLKKL L+A FD+++DGS +S E+ D D K              
Sbjct: 690  GSGKPGVQDELKVEELRLKKLALKAKFDSEYDGSELSGEQVDEDRKKSKRDQSDGGGYFD 749

Query: 483  MVKEEAELIRQMKIKGLNDIDEATLVEMEGYRTGTYLRLEIRDVPCEMVEHFDPCHPXXX 304
             +KEE EL +QM I  LND+DE T VE+EG+RTGTY+RLE+  VP E+VEHFDPCHP   
Sbjct: 750  KLKEEIELRKQMNISELNDLDEDTRVEIEGFRTGTYVRLEVHGVPFELVEHFDPCHPILV 809

Query: 303  XXXXXXXXXXGYMQILLKRHRWHRKVLKTRDPIIASIG*RRYQTTPIYAIEDQNGRHRML 124
                      GYMQ+ LKRHRWHRKVLKT+DPI+ SIG RR+QTTPIYAIED+NGRHRML
Sbjct: 810  GGIGLGEENTGYMQVSLKRHRWHRKVLKTKDPIVVSIGWRRFQTTPIYAIEDRNGRHRML 869

Query: 123  KYTPKHMHCLAMF*GPLAPPKTGVVAVQNLANSQ 22
            KYTP+HMHC AMF GPLAPPK+GV+AVQ+L++++
Sbjct: 870  KYTPEHMHCFAMFWGPLAPPKSGVLAVQSLSSNK 903


>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
            gi|241921770|gb|EER94914.1| hypothetical protein
            SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score =  280 bits (717), Expect = 2e-73
 Identities = 152/271 (56%), Positives = 186/271 (68%), Gaps = 9/271 (3%)
 Frame = -3

Query: 807  EEKYESIRDRFVTGDWSKAXXXXXXXXXXXXXXXXXNASIGDFEDLETGEKHESRV---- 640
            E+  +SIRDRFVTG+WSKA                     GDFEDLETGE H S+     
Sbjct: 640  EDLIKSIRDRFVTGNWSKAALRGQDADENGEDGEEIY---GDFEDLETGEVHMSQAVEDA 696

Query: 639  -NGEDVDAEQRRLKKLELRANFDAQ--FDGS-VSPEEDNDTKNEANHHQFIITEA-KMVK 475
               +D + E+RRLKKL LRA FDAQ  +DGS +S +E +D K ++   Q         +K
Sbjct: 697  ERKDDPEVEERRLKKLALRAKFDAQLTYDGSELSDDEVDDVKKKSRQEQSNGGGYFDKLK 756

Query: 474  EEAELIRQMKIKGLNDIDEATLVEMEGYRTGTYLRLEIRDVPCEMVEHFDPCHPXXXXXX 295
            EE EL +QM +  LND+DE T V++EG+RTGTY+RLE+  VP E+VEHF+PCHP      
Sbjct: 757  EEMELRKQMNMSELNDLDEETRVDIEGFRTGTYVRLEVHGVPFELVEHFNPCHPILVGGI 816

Query: 294  XXXXXXXGYMQILLKRHRWHRKVLKTRDPIIASIG*RRYQTTPIYAIEDQNGRHRMLKYT 115
                   G+MQ  LKRHRWHRKVLKT+DPII SIG RR+QTTP+YAIED+NGRHRMLKYT
Sbjct: 817  GLGEENTGFMQASLKRHRWHRKVLKTKDPIIVSIGWRRFQTTPVYAIEDRNGRHRMLKYT 876

Query: 114  PKHMHCLAMF*GPLAPPKTGVVAVQNLANSQ 22
            P+HMHC AMF GPLAPPK+GV+AVQNL+N+Q
Sbjct: 877  PEHMHCFAMFWGPLAPPKSGVLAVQNLSNNQ 907


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  275 bits (703), Expect = 9e-72
 Identities = 153/275 (55%), Positives = 177/275 (64%), Gaps = 12/275 (4%)
 Frame = -3

Query: 810  EEEKYESIRDRFVTGDWSKAXXXXXXXXXXXXXXXXXNASIGDFEDLETGEKHESR---- 643
            +EE YESIRDRFVTGDWSKA                  +  GDFEDLETGEKH +     
Sbjct: 642  DEEIYESIRDRFVTGDWSKAAQRNKLPTANDEDDED--SVYGDFEDLETGEKHGNHQKEE 699

Query: 642  -----VNGEDVDAEQRRLKKLELRANFDAQFDGSVSPEEDNDTKNEANHHQFIITEAKMV 478
                 +  ED   EQR+LKKL L               E+ D K+ A  H+    E+  +
Sbjct: 700  SGNVSMQKEDELEEQRKLKKLALH--------------EEVDEKHGAKFHRGQANESGYI 745

Query: 477  ---KEEAELIRQMKIKGLNDIDEATLVEMEGYRTGTYLRLEIRDVPCEMVEHFDPCHPXX 307
               KEE E+ +Q  I  LND+DE T +E+EG++TGTYLRLE+ DVP EMVEHFDPC P  
Sbjct: 746  DKLKEEIEIRKQRNIAELNDLDEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPIL 805

Query: 306  XXXXXXXXXXXGYMQILLKRHRWHRKVLKTRDPIIASIG*RRYQTTPIYAIEDQNGRHRM 127
                       GYMQ  LKRHRWHRKVLKT+DP+I SIG RRYQTTP+YAIED+NGRHRM
Sbjct: 806  VGGIGLGEEHVGYMQARLKRHRWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRM 865

Query: 126  LKYTPKHMHCLAMF*GPLAPPKTGVVAVQNLANSQ 22
            LKYTP+HMHCLA F GPLAPP TGVVAVQNLAN+Q
Sbjct: 866  LKYTPEHMHCLATFWGPLAPPNTGVVAVQNLANNQ 900


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  274 bits (701), Expect = 2e-71
 Identities = 150/278 (53%), Positives = 180/278 (64%), Gaps = 15/278 (5%)
 Frame = -3

Query: 810  EEEKYESIRDRFVTGDWSKAXXXXXXXXXXXXXXXXXNAS--IGDFEDLETGEKHES--- 646
            +E+ +  IR+RFV+G+ +KA                       GDFEDLETGE HE+   
Sbjct: 621  DEKDHGEIRNRFVSGNLAKAARRNALQKANTEEEEEDEDEDVYGDFEDLETGENHENYKT 680

Query: 645  -------RVNGEDVDAEQRRLKKLELRANFDAQFDGSVSPEEDNDTKNEANHHQFIITEA 487
                      G D +AE+RRLKKL L A F +++       ED   +NEA  H+    E+
Sbjct: 681  DDAFAITTQKGVDREAEERRLKKLALHAKFVSRYPFL----EDTGNENEAKFHREQPNES 736

Query: 486  KMV---KEEAELIRQMKIKGLNDIDEATLVEMEGYRTGTYLRLEIRDVPCEMVEHFDPCH 316
              +   KEE EL +QM I  LND+DE T +E+EG+RTGTYLRLE+ DVPCEMVEHFDP H
Sbjct: 737  NYIDKLKEEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYH 796

Query: 315  PXXXXXXXXXXXXXGYMQILLKRHRWHRKVLKTRDPIIASIG*RRYQTTPIYAIEDQNGR 136
            P             GYMQ  LKRHRWH+KVLKTRDPII S+G RRYQTTP+YAIED NGR
Sbjct: 797  PILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGR 856

Query: 135  HRMLKYTPKHMHCLAMF*GPLAPPKTGVVAVQNLANSQ 22
            HRMLKYTP+HMHCLAMF GPLAPP TG+VAVQ L+N+Q
Sbjct: 857  HRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQ 894


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