BLASTX nr result

ID: Angelica23_contig00020305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020305
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
 Frame = -2

Query: 280 MAVIVLCSSSFCCSNFKH------IQYGKFYSSRFNKGRNFESVKVLPFGSMVNWKKHRK 119
           M VI+L SSS CCS FK+       +      +    G    ++KVLP G  VNWKKHRK
Sbjct: 1   MDVIILSSSSSCCSKFKYGCAVTGTKPSVLSCNESLGGIKIGNLKVLPSGCRVNWKKHRK 60

Query: 118 KIVGKCGVSINSSNFSEWVNGMCKNKISFEEIIMVLKSI 2
           K VG CG  I SS     V    ++ +S EE+  VLKSI
Sbjct: 61  KQVGVCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSI 99


>ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|222854685|gb|EEE92232.1|
           predicted protein [Populus trichocarpa]
          Length = 1115

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
 Frame = -2

Query: 280 MAVIVLCSSSFCCSNFKHIQYGKFYSSRFNK-----------GRNFESVKVLPFGSMVNW 134
           MAV++L SSS CCS    I Y   +S +              G  F +++V PFGS VNW
Sbjct: 1   MAVLILSSSSMCCSC---IDYSIAFSEQNRLSDFRHKNGSLGGEKFGTLRVFPFGSNVNW 57

Query: 133 KKHRKKIVGKCGVSINSSNFSEWVNGMCKNKISFEEIIMVLKSI 2
           KK+ KK V  CG ++ S N    VNG  +   S +E++ VL SI
Sbjct: 58  KKNNKKQVAFCGFALKSQNEELVVNGKPRKGSSSDEVLGVLHSI 101


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