BLASTX nr result

ID: Angelica23_contig00020281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020281
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08838.1| Thioredoxin-like fold [Medicago truncatula]             79   5e-13
ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [S...    76   5e-12
ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [S...    70   3e-10
ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [S...    69   5e-10
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    69   5e-10

>gb|ABN08838.1| Thioredoxin-like fold [Medicago truncatula]
          Length = 198

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
 Frame = -2

Query: 515 KLGSYTAKSGYHFWFDRVNH---LSEDELSHGWRRLWCLKIPHKAKYFIWRLCKNNIPC- 348
           K G+Y+ KS Y    D +NH   + +  +S  W  +W LK+P K K F+WR C+N +P  
Sbjct: 12  KDGAYSVKSAYK---DILNHDVSVVQHRVSGNWNCVWSLKLPPKVKNFLWRACRNCLPTR 68

Query: 347 ------------------CWMLSEVEFDTMLIDDLPKW-LLQTLCSASTEIITSIVTTLW 225
                              W      FDT        + +LQ L     ++      TLW
Sbjct: 69  ICLQVKGVQCTDRCARIGLWSPLMATFDTNASFPTNVFAILQHLDQHQKQVFD---VTLW 125

Query: 224 GIWMARNKVVWENKESEPNIAMSMSNKMVIEWQTAQIRPDIKGPLASQSMHQSTVKWKPP 45
            IW  RN  VW N           ++ ++  W+ AQI   I  P+   S+  + +KW  P
Sbjct: 126 SIWKHRNNKVWNNVTETSQAICDRASSLLSSWRNAQI---ILHPIPQHSITLNDLKWVKP 182

Query: 44  EEGSYKINVDAA 9
               +K NVDA+
Sbjct: 183 SPDRFKCNVDAS 194


>ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [Sorghum bicolor]
           gi|241937862|gb|EES11007.1| hypothetical protein
           SORBIDRAFT_06g020406 [Sorghum bicolor]
          Length = 395

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 41/182 (22%)
 Frame = -2

Query: 428 WRRLWCLKIPHKAKYFIWRLCKNNIP---------------------------------- 351
           W++LW +K+P K K F WRL  N+IP                                  
Sbjct: 76  WKKLWSMKLPSKIKVFCWRLALNSIPTASVLKSRNLASTSHCKICGAVDDTWEHSLLFCT 135

Query: 350 ---CCWMLSEVEFDTML----IDDLPKWLLQTLCSASTEIITSIVTTLWGIWMARNKVVW 192
              C W L + +   ++    I +   W+    C+        ++ T W IW AR K + 
Sbjct: 136 MSKCVWALLDEDITNLISHLRISNPKHWITFMCCNIPQADGIRVLVTCWAIWQARRKAIH 195

Query: 191 ENKESEPNIAMSMSNKMVIEWQTAQIRPDIKGPLASQSMHQSTVKWKPPEEGSYKINVDA 12
           E     P   M   N+ + E Q  +   ++KG   +QS  Q T  WK P++G  KINVDA
Sbjct: 196 EGVFQSPFSIMVTINRQIEELQMIR-GMELKGGNQNQSK-QKTRLWKAPDQGKCKINVDA 253

Query: 11  AI 6
           A+
Sbjct: 254 AV 255


>ref|XP_002451109.1| hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor]
           gi|241936952|gb|EES10097.1| hypothetical protein
           SORBIDRAFT_05g024215 [Sorghum bicolor]
          Length = 357

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 41/206 (19%)
 Frame = -2

Query: 500 TAKSGYHFWFDRVNHLSEDELSHGWRRLWCLKIPHKAKYFIWRLCKNNIP---------- 351
           T K+   +   R N  +   + + W+ LW +KIP K K F WRL  N++P          
Sbjct: 5   TKKNREDYLESRGNCSNVQRIQNEWKHLWSMKIPSKIKVFCWRLAHNSLPTGTILKNKNL 64

Query: 350 ---------------------------CCWMLSEVEFDTML----IDDLPKWLLQTLCSA 264
                                      C W+L + +   +L      D   W+    C+ 
Sbjct: 65  AATTNCKICGAEEDTWIHSLLQCNISKCVWVLMDEDLLDLLASLHFSDPKHWISYICCNI 124

Query: 263 STEIITSIVTTLWGIWMARNKVVWENKESEPNIAMSMSNKMVIEWQTAQIRPDIKGPLAS 84
                  I+ T W IW AR K + +     P   M M+N+++ E++  Q   D K     
Sbjct: 125 PKADGVRILVTCWAIWYARRKAIHDRIFQSPLSIMMMTNRLIEEFEFVQ-EIDFKEKDHY 183

Query: 83  QSMHQSTVKWKPPEEGSYKINVDAAI 6
           Q+   +T K   P+ G  KIN DAAI
Sbjct: 184 QN-KSTTPKLISPQNGINKINTDAAI 208


>ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [Sorghum bicolor]
           gi|241934143|gb|EES07288.1| hypothetical protein
           SORBIDRAFT_04g028480 [Sorghum bicolor]
          Length = 316

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 41/206 (19%)
 Frame = -2

Query: 500 TAKSGYHFWFDRVNHLSEDELSHGWRRLWCLKIPHKAKYFIWRLCKNNIP---------- 351
           T K+   +   R N      + + W+ LW +KIP K K F WRL  N++P          
Sbjct: 5   TKKNREDYLESRGNCSDVQRIQNEWKHLWSMKIPSKIKVFCWRLAHNSLPTGTILKNKNL 64

Query: 350 ---------------------------CCWMLSEVEFDTML----IDDLPKWLLQTLCSA 264
                                      C W L + +   +L      D   W+    C+ 
Sbjct: 65  TATANCKICGAEEDTWIHSLLQCNISKCVWALMDEDLLDLLASLHFSDPKHWISYICCNI 124

Query: 263 STEIITSIVTTLWGIWMARNKVVWENKESEPNIAMSMSNKMVIEWQTAQIRPDIKGPLAS 84
                  I+ T W IW AR K + +     P   M M+N+++ E++  Q   D K     
Sbjct: 125 PKADGVRILVTCWAIWYARRKAIHDRIFQSPLSIMMMTNRLIEEFEFIQ-ETDFKE--KD 181

Query: 83  QSMHQSTVKWKPPEEGSYKINVDAAI 6
              ++ST     P+ G  KIN DAAI
Sbjct: 182 HYQNKSTQNLISPQNGISKINTDAAI 207


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 54/220 (24%), Positives = 83/220 (37%), Gaps = 49/220 (22%)
 Frame = -2

Query: 518 TKLGSYTAKSGYHFWFDRVNHLSEDELSHGWRRLWCLKIPHKAKYFIWRLCKNNIPC--- 348
           T  G+YT KS Y    D ++       +  W  +W L IPH+ + F+WRL  N +P    
Sbjct: 85  TTTGNYTVKSAYRICSDLLHPHDSAHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVN 144

Query: 347 ----------------------------------CW-------MLSEV-----EFDTMLI 306
                                             CW       +LSE+      F T+L 
Sbjct: 145 LNARGIQCEESCVMFENFAECHTHLFFVCAKAMDCWKNIGLHVVLSELLPLANNFTTLLF 204

Query: 305 DDLPKWLLQTLCSASTEIITSIVTTLWGIWMARNKVVWENKESEPNIAMSMSNKMVIEWQ 126
           D      +  LCS   +    +   LW +W +RN  +W++ ++   I +S +   + EW 
Sbjct: 205 D-----FMHRLCSQQQQAAGML---LWSLWKSRNIKLWDSTDTTTAITISRAKDTLHEWS 256

Query: 125 TAQIRPDIKGPLASQSMHQSTVKWKPPEEGSYKINVDAAI 6
             Q     K    + + H   + W  P  G  K N+DAAI
Sbjct: 257 CMQ---SAKTQPINPNHH---ISWVKPTGGMIKCNMDAAI 290


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