BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020193
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   117   2e-45
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   136   2e-41
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]   138   3e-40
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   142   1e-39
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   124   1e-36

>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 573

 Score =  117 bits (292), Expect(3) = 2e-45
 Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
 Frame = -2

Query: 1293 GPDGMNPAFYQSFWSIYHPSFYQRFWSIIGNGVTQECLNIFSSNSIHKYLNDTLVVLISS 1114
            GPDG+N AFY             RFW  +G  +     +  +S S    LN T +VL   
Sbjct: 7    GPDGLNSAFYH------------RFWKELGGEIFFVASSWLTSGSFPPELNATHIVLAPK 54

Query: 1113 KNSPKTINDLRLISLCNEMMKIITKMLANRLKLVLPD---------IPGRSITNNVIAAF 961
             ++P+ + DLR ISLCN + KII+K+LANRL+ ++           +P RSI +N I AF
Sbjct: 55   GDNPEYMKDLRPISLCNVLYKIISKVLANRLRPLIDKWISTEQAAFVPSRSIMDNAITAF 114

Query: 960  EIYHWMNKKKQGKVGFSALKIDMNTTYDKLEWDFIQGIMERMSFANK*INRIHMCVN 790
            E+ H M  K++GK G  ALK+D++  +D + W ++Q I+ ++ F+ + I+ + MC++
Sbjct: 115  EVLHCMKCKRKGKTGDIALKLDISKAFDSVSWSYLQAILCKLGFSPQWISWMMMCIS 171



 Score = 58.5 bits (140), Expect(3) = 2e-45
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
 Frame = -3

Query: 803 ICVSTGRY--IF-------LISGR-----VQVSPYLFLLCAEG-SSIIQRKQLQGALHGC 669
           +C+ST  Y  IF       +I GR       +SPYL+++CAEG S+II+  + +G +HG 
Sbjct: 168 MCISTVEYHVIFNGDRIGPIIPGRGLRQGCPLSPYLYIICAEGLSAIIKNHEFRGKIHGV 227

Query: 668 LTARRAPVITHLFFAGNCYLFCKQNKHRHSL*MNVYSS 555
              R  P I+HL FA + +LFCK  +       ++ SS
Sbjct: 228 RICRTTPSISHLLFADDNFLFCKATESEAQYVKDIISS 265



 Score = 55.5 bits (132), Expect(3) = 2e-45
 Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
 Frame = -1

Query: 547 GIG*AISRNEGEVFCYI*EKVWNRTRSWEGKILSRAGKEILLKAVFQFIPSY----VILD 380
           G+   + RN+  +F Y+ +++W + +SW  + LSRA KE+L+K+V Q IPSY     ++ 
Sbjct: 283 GLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFLIP 342

Query: 379 DNLCE 365
            +LCE
Sbjct: 343 ASLCE 347


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  136 bits (342), Expect(2) = 2e-41
 Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 9/160 (5%)
 Frame = -2

Query: 1245 YHPSFYQRFWSIIGNGVTQECLNIFSSNSIHKYLNDTLVVLISSKNSPKTINDLRLISLC 1066
            + P FYQR W I+G  V   C+   +       LN T +VLI  K+   ++ DLR ISLC
Sbjct: 1006 FSPXFYQRHWEIVGEXVANACIGWLNDGMFPDSLNRTNIVLIPKKSEVISMTDLRPISLC 1065

Query: 1065 NEMMKIITKMLANRLKLVLPDI---------PGRSITNNVIAAFEIYHWMNKKKQGKVGF 913
            N + KI +K+LANRLK VL  +         P RSIT++++ A E+ H++ +K++G++G+
Sbjct: 1066 NVIFKIASKLLANRLKKVLDXVVSEAQSAFVPXRSITDSILIAHEVLHFLKRKREGRIGY 1125

Query: 912  SALKIDMNTTYDKLEWDFIQGIMERMSFANK*INRIHMCV 793
             ALKID++  YDKLEW+++  ++E M F++K +  + MCV
Sbjct: 1126 XALKIDISKAYDKLEWNYLFAVLEAMGFSSKWLEWMRMCV 1165



 Score = 60.8 bits (146), Expect(2) = 2e-41
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = -3

Query: 752  VSPYLFLLCAEG-SSIIQRKQLQGALHGCLTARRAPVITHLFFAGNCYLFCK 600
            +SPYLF+L AEG S+++++ +  G LHGC  AR AP ++HLFFA + YLF K
Sbjct: 1194 LSPYLFILAAEGLSALLKQGERCGVLHGCSVARGAPXVSHLFFADBSYLFFK 1245



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
 Frame = -1

Query: 547  GIG*AISRNEGEVFCYI*EKVWNRTRSWEGKILSRAGKEILLKAVFQFIPSYV----ILD 380
            G+   + +N+ ++F ++  KVWNR ++W G+ LSRAGKEI LK V Q IP+YV    +L 
Sbjct: 1307 GMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLP 1366

Query: 379  DNLC 368
             +LC
Sbjct: 1367 KDLC 1370


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score =  138 bits (348), Expect(2) = 3e-40
 Identities = 64/157 (40%), Positives = 106/157 (67%), Gaps = 5/157 (3%)
 Frame = -2

Query: 1245 YHPSFYQRFWSIIGNGVTQECLNIFSSNSIHKYLNDTLVVLISSKNSPKTINDLRLISLC 1066
            ++ +F+Q FW +IG  +   C +  ++N     LN+T++VLI   ++P ++ DLR I+LC
Sbjct: 76   FNLAFFQHFWPLIGKEIFHACSSWLNNNEFPASLNETIIVLIPKNDNPVSMRDLRPIALC 135

Query: 1065 NEMMKIITKMLANRLKLVLPD-----IPGRSITNNVIAAFEIYHWMNKKKQGKVGFSALK 901
            N + KII K+LA RLK+++ +     +P ++IT+NV+ AFE+ H+M +K  GKVG  ALK
Sbjct: 136  NVLYKIIAKVLAXRLKVLINESQSTFVPAKAITBNVVVAFELIHYMKRKTHGKVGDVALK 195

Query: 900  IDMNTTYDKLEWDFIQGIMERMSFANK*INRIHMCVN 790
            ID++  YD++ WD+++ IM RM F +K +  I +CV+
Sbjct: 196  IDISKAYDRIRWDYLKAIMLRMGFDSKWMEWIILCVS 232



 Score = 54.7 bits (130), Expect(2) = 3e-40
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
 Frame = -3

Query: 803 ICVSTGRYIFLISGRV--------------QVSPYLFLLCAEG-SSIIQRKQLQGALHGC 669
           +CVS   Y   ++G +               +SPYLF++CAEG SS+I++ + +G +HGC
Sbjct: 229 LCVSIVSYSVSVNGELVGPFYPGRELRQGDPLSPYLFIICAEGLSSLIKQAERRGDIHGC 288

Query: 668 LTARRAPVITHLFFAGNCYLF 606
              R AP I+HL F  + + F
Sbjct: 289 RICRGAPRISHLLFVDDSFFF 309


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
            gi|241926916|gb|EES00061.1| hypothetical protein
            SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  142 bits (359), Expect(2) = 1e-39
 Identities = 68/156 (43%), Positives = 104/156 (66%), Gaps = 9/156 (5%)
 Frame = -2

Query: 1233 FYQRFWSIIGNGVTQECLNIFSSNSIHKYLNDTLVVLISSKNSPKTINDLRLISLCNEMM 1054
            FY++FWS++G+ V +E L + +   I +  NDT++VLI   N+P+ + DLR ISLCN + 
Sbjct: 36   FYKKFWSVVGDQVKKEVLAVLNGGPIPEGWNDTIIVLIPKTNTPQMLKDLRPISLCNVLY 95

Query: 1053 KIITKMLANRLKLVLPDI---------PGRSITNNVIAAFEIYHWMNKKKQGKVGFSALK 901
            K+I+K+LANRLK +LP+I         PGR IT+NV+ A+EI H +   K+G  G +A+K
Sbjct: 96   KLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGGLAAIK 155

Query: 900  IDMNTTYDKLEWDFIQGIMERMSFANK*INRIHMCV 793
            +DM+  YD++EW F++ +M +M F  K +  I  CV
Sbjct: 156  LDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCV 191



 Score = 48.1 bits (113), Expect(2) = 1e-39
 Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -3

Query: 752 VSPYLFLLCAEG-SSIIQRKQLQGALHGCLTARRAPVITHLFFAGNCYLFCK 600
           +SPYLF++CAEG S+++Q+ + +G + G    R AP + HLFFA +  +  +
Sbjct: 220 LSPYLFIICAEGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSLILMR 271


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 653

 Score =  124 bits (311), Expect(2) = 1e-36
 Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
 Frame = -2

Query: 1293 GPDGMNPAFYQSFWSIYHPSFYQRFWSIIGNGVTQECLNIFSSNSIHKYLNDTLVVLISS 1114
            GPDG+NP            +FY+RFW++ G  V   C       ++   L DT +VLI  
Sbjct: 39   GPDGLNP------------TFYKRFWTLCGEEVVAACRRWLHEGNLPTALGDTNIVLIPK 86

Query: 1113 KNSPKTINDLRLISLCNEMMKIITKMLANRLKLVLPD---------IPGRSITNNVIAAF 961
             + P+T+ DLR ISLCN + KI+ K LANRL+ VL           + GR+IT+N++ A 
Sbjct: 87   CDHPRTMRDLRPISLCNVVYKILAKTLANRLQRVLDKCISVEQSGFVAGRTITDNILIAL 146

Query: 960  EIYHWMNKKKQGKVGFSALKIDMNTTYDKLEWDFIQGIMERMSF 829
            EI H++  K  G  G +ALKID++ TYD+++W+++  IME+M F
Sbjct: 147  EIIHYLKCKTWGIKGEAALKIDISKTYDRVDWNYLFSIMEKMGF 190



 Score = 57.0 bits (136), Expect(2) = 1e-36
 Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -3

Query: 752 VSPYLFLLCAEG-SSIIQRKQLQGALHGCLTARRAPVITHLFFAGNCYLFCKQNKH 588
           +SPYLF+LCAEG S++I++ +    LHG    +RAP ++HL FA + +LF + N++
Sbjct: 231 LSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANEN 286