BLASTX nr result

ID: Angelica23_contig00020085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020085
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...    93   2e-17
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               93   2e-17
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    93   2e-17
ref|NP_001077479.1| DNA repair protein RAD51-like 4 [Arabidopsis...    78   9e-13
gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair prot...    75   6e-12

>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 AVEDFLFHDIYKLQLSTKQHSNSERLEQGITVILSIIEGQHQPWLNGMELLEEAQGNKRS 21
           +VED L HD+Y L    +Q S SERL+QGIT ILSII+GQHQPWLNGMELLE+AQ NK+ 
Sbjct: 29  SVEDILIHDLYMLVAFAEQQSTSERLKQGITQILSIIDGQHQPWLNGMELLEDAQQNKQV 88

Query: 20  ISTGYE 3
           +STG E
Sbjct: 89  LSTGCE 94


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 AVEDFLFHDIYKLQLSTKQHSNSERLEQGITVILSIIEGQHQPWLNGMELLEEAQGNKRS 21
           +VED L HD+Y L    +Q S SERL+QGIT ILSII+GQHQPWLNGMELLE+AQ NK+ 
Sbjct: 81  SVEDILIHDLYMLVAFAEQQSTSERLKQGITQILSIIDGQHQPWLNGMELLEDAQQNKQV 140

Query: 20  ISTGYE 3
           +STG E
Sbjct: 141 LSTGCE 146


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 AVEDFLFHDIYKLQLSTKQHSNSERLEQGITVILSIIEGQHQPWLNGMELLEEAQGNKRS 21
           +VED L HD+Y L    +Q S SERL+QGIT ILSII+GQHQPWLNGMELLE+AQ NK+ 
Sbjct: 29  SVEDILIHDLYMLVAFAEQQSTSERLKQGITQILSIIDGQHQPWLNGMELLEDAQQNKQV 88

Query: 20  ISTGYE 3
           +STG E
Sbjct: 89  LSTGCE 94


>ref|NP_001077479.1| DNA repair protein RAD51-like 4 [Arabidopsis thaliana]
           gi|332190053|gb|AEE28174.1| DNA repair protein
           RAD51-like 4 [Arabidopsis thaliana]
          Length = 304

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/74 (47%), Positives = 57/74 (77%)
 Frame = -2

Query: 230 LFHILLFCSRAVEDFLFHDIYKLQLSTKQHSNSERLEQGITVILSIIEGQHQPWLNGMEL 51
           +F ++ F   AVEDFL HD+Y+L   +++ +N++RL++GIT+ILS+IE Q +P +NG++L
Sbjct: 1   MFVLMAFLKIAVEDFLLHDLYELTAFSQRQTNADRLKEGITLILSLIERQCRPLVNGLKL 60

Query: 50  LEEAQGNKRSISTG 9
           LE+   NK ++STG
Sbjct: 61  LEDLHRNKHTLSTG 74


>gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair protein RAD51 homolog 4 (TRAD)
           from Homo sapiens gi|6174940 [Arabidopsis thaliana]
          Length = 285

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/70 (48%), Positives = 54/70 (77%)
 Frame = -2

Query: 218 LLFCSRAVEDFLFHDIYKLQLSTKQHSNSERLEQGITVILSIIEGQHQPWLNGMELLEEA 39
           + F   AVEDFL HD+Y+L   +++ +N++RL++GIT+ILS+IE Q +P +NG++LLE+ 
Sbjct: 1   MAFLKIAVEDFLLHDLYELTAFSQRQTNADRLKEGITLILSLIERQCRPLVNGLKLLEDL 60

Query: 38  QGNKRSISTG 9
             NK ++STG
Sbjct: 61  HRNKHTLSTG 70


Top