BLASTX nr result

ID: Angelica23_contig00020075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020075
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77042.1| hypothetical protein VITISV_036004 [Vitis vinifera]   130   8e-28
emb|CBI28252.3| unnamed protein product [Vitis vinifera]              106   2e-20
ref|XP_002325196.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-11
ref|XP_003603469.1| Transcription elongation factor A protein [M...    63   2e-07
ref|XP_003595680.1| hypothetical protein MTR_2g059080 [Medicago ...    61   8e-07

>emb|CAN77042.1| hypothetical protein VITISV_036004 [Vitis vinifera]
          Length = 524

 Score =  130 bits (327), Expect = 8e-28
 Identities = 132/469 (28%), Positives = 201/469 (42%), Gaps = 43/469 (9%)
 Frame = +3

Query: 144  MWHEKQKNCRLSVQKTSPKKSFGDYVYGKVLPPSGNHVDS--FNAFSGKRKVAAID---- 305
            MWH+KQ+N  L  Q   P++  G ++  K+L       D+   +  S KRK  A+D    
Sbjct: 1    MWHKKQQNVGLPGQVRHPERIEGVHLENKILLAQSGSSDTNFLSESSRKRKSEALDQQGI 60

Query: 306  ---------LTRESNV-NEFRSPVGVNEEESKNGVHAKKLFSEQAASSQQFTNNDNNY-G 452
                        ESN+ ++  S  G+N + +     A  LFS Q+    +  +    + G
Sbjct: 61   VSESVLKYNFFGESNLQHKAGSLFGMNVQSN-----ASVLFSPQSTEPIRHQSEKRQFHG 115

Query: 453  SN-FKEAWSTNGADSRRNATDKPNNASLSVPDDSLCHKEAPSATMMPVGKNVMVLT--QQ 623
             N           +  +   +K ++ S+SVP  S C K   +   M  G+ + V     Q
Sbjct: 116  QNDLAVTRQVKNVNDHKPGIEKISSYSVSVPPHSSCQKVPSTLIEMLNGETLKVPNWQSQ 175

Query: 624  ARECQNEANISLPPFPEACNAVSVAVPSVIKSRFG--SHTEEDYLQQEFCNIKPEYLVSV 797
            AR   N  N S         AV+  +   +   FG   H   +Y   E  N  P   +  
Sbjct: 176  ARSFLNSCNTSTEKA-----AVNPGLQD-LTGFFGHRDHVITNYSPMESYN-SPSESLRP 228

Query: 798  SNSNQEVQIKRSTEDSDKSASSHKTPY----ELKQSGLFPNTIGTSNPL----------- 932
            S   Q+  +K      D  +SS+K+      +L Q     NT G S+ +           
Sbjct: 229  SVLMQQSLVKPDGFSVDGKSSSYKSSRLISSDLDQRQHSSNTQGPSDLINVGSAFIGAST 288

Query: 933  -----YTEDCKPLQNEVQFRGSMLGFLSGKTYESDEQKHVRSQPRAASPEMKKSKNTSVD 1097
                   E+C+ LQNEVQ   +  G   G+  +      ++   +    +++  KN   +
Sbjct: 289  CKRFEQNENCRLLQNEVQPCSAAKGNDVGREGQDHGDGMIKIMKKTEGSDIENPKNLLTE 348

Query: 1098 DILSKNGSGR-DSLVGDGQKIVQHEGPFKADENIKLSSGKPSITVNDKLWDGRXXXXXXX 1274
               +KN     ++++   Q+  Q  G  K DE  K  +GK + TV +KLWDG        
Sbjct: 349  RTSAKNDDSLGNAVIRPCQRNDQCYGSIKLDEKSKPLAGKVAQTVAEKLWDGSLQLNSAV 408

Query: 1275 XXXXXXXXXXGEKLPDTSWSGFIEVKGKVRLEAFEKYVQDLPRSRNRGL 1421
                      GEK+PD +WS F+EVKGKV+LEAFEKY++DLPRSRNRGL
Sbjct: 409  TVTTVAFFKSGEKIPDVNWSEFVEVKGKVKLEAFEKYIKDLPRSRNRGL 457


>emb|CBI28252.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  106 bits (264), Expect = 2e-20
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
 Frame = +3

Query: 939  EDCKPLQNEVQFRGSMLGFLSGKTYESDEQKHVRSQPRAASPEMKKSKNTSVDDILSKNG 1118
            E+C+ LQNEVQ   +  G   G+  +      ++   +    +++  KN   +   +KN 
Sbjct: 65   ENCRLLQNEVQPCSAAKGNDVGREGQDHGDGMIKIMKKTEGSDIENPKNLLTERTSAKND 124

Query: 1119 SGR-DSLVGDGQKIVQHEGPFKADENIKLSSGKPSITVNDKLWDGRXXXXXXXXXXXXXX 1295
                ++++   Q+  Q  G  K DE  K  +GK + TV +KLWDG               
Sbjct: 125  DSLGNAVIRPCQRNDQCYGSIKLDEKSKPLAGKVAQTVAEKLWDGSLQLNSAVTVTTVAF 184

Query: 1296 XXXGEKLPDTSWSGFIEVKGKVRLEAFEKYVQDLPRSRNRGL 1421
               GEK+PD +WS F+EVKGKV+LEAFEKY++DLPRSRNRGL
Sbjct: 185  FKSGEKIPDVNWSEFVEVKGKVKLEAFEKYIKDLPRSRNRGL 226


>ref|XP_002325196.1| predicted protein [Populus trichocarpa] gi|222866630|gb|EEF03761.1|
            predicted protein [Populus trichocarpa]
          Length = 72

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = +3

Query: 1305 GEKLPDTSWSGFIEVKGKVRLEAFEKYVQDLPRSRNRGL 1421
            GEK+PD  WS F+EVKGKVRLEAFEKYVQDLPRSRNRGL
Sbjct: 7    GEKMPDLKWSEFLEVKGKVRLEAFEKYVQDLPRSRNRGL 45


>ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
            gi|355492517|gb|AES73720.1| Transcription elongation
            factor A protein [Medicago truncatula]
          Length = 1132

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
 Frame = +3

Query: 1014 ESDEQKHVRSQPRAASPEMKKSKNTSVDDILSKNGSGRDSLVGDGQKIVQHEGPFKADE- 1190
            +++E+K V +   + S + K  ++ S  D    +G  ++ +  DG+K   ++   +A + 
Sbjct: 656  DAEEEKKVNADAGSISSDAKHGESRS--DTKPTDGHSKE-MSPDGKKSTSNDAELRASQF 712

Query: 1191 NIKLSSGKPSITVN------DKLWDGRXXXXXXXXXXXXXXXXXGEKLPDTSWSGFIEVK 1352
            + +   GK  ++        + LW+G                  GEK     W GF+E+K
Sbjct: 713  HAEERHGKDKVSKTTVPIKGECLWEGMLQPNISTTDSVISIFKSGEKTSTKDWPGFLEIK 772

Query: 1353 GKVRLEAFEKYVQDLPRSRNRGL 1421
            G+VRL+AFEK++++LP+SR+R +
Sbjct: 773  GRVRLDAFEKFLRELPQSRSRAI 795


>ref|XP_003595680.1| hypothetical protein MTR_2g059080 [Medicago truncatula]
            gi|355484728|gb|AES65931.1| hypothetical protein
            MTR_2g059080 [Medicago truncatula]
          Length = 386

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 30/64 (46%), Positives = 36/64 (56%)
 Frame = +3

Query: 1230 NDKLWDGRXXXXXXXXXXXXXXXXXGEKLPDTSWSGFIEVKGKVRLEAFEKYVQDLPRSR 1409
            NDKLWDG                  GEK+PD  WS  I VKG V+L+ FEKY+Q+LP S 
Sbjct: 16   NDKLWDGYLQLNSTPTVSAVGFFEGGEKMPDVKWSRSIVVKGTVKLQDFEKYIQELPLSC 75

Query: 1410 NRGL 1421
            N+ L
Sbjct: 76   NKEL 79


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