BLASTX nr result

ID: Angelica23_contig00020023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020023
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   105   1e-44
ref|XP_002320345.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-44
ref|XP_002523079.1| arginine/serine-rich splicing factor, putati...   101   4e-44
ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|2...   103   7e-44
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   103   2e-43

>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score =  105 bits (261), Expect(2) = 1e-44
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = +2

Query: 305 SGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIR 457
           +GLPSSASWQDLKDHMRRAGDVCFSQVFR+G GTTGIVDYTNYDDMKYAI+
Sbjct: 116 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIK 166



 Score = 99.8 bits (247), Expect(2) = 1e-44
 Identities = 52/75 (69%), Positives = 59/75 (78%)
 Frame = +1

Query: 1   FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGNGNSSSTDRHSNHXXXXXXXXXXXXV 180
           FE+A DA+DAIRGRDGYDFDGHRLRVELAHGGR  G+SSS DR+S+H            V
Sbjct: 52  FEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGR--GHSSSNDRYSSH----GGSRGGRGV 105

Query: 181 SRRSDYRVMVSGLPS 225
           SRRSDYRV+V+GLPS
Sbjct: 106 SRRSDYRVLVTGLPS 120


>ref|XP_002320345.1| predicted protein [Populus trichocarpa] gi|222861118|gb|EEE98660.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  103 bits (256), Expect(2) = 3e-44
 Identities = 45/51 (88%), Positives = 50/51 (98%)
 Frame = +2

Query: 305 SGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIR 457
           +GLPSSASWQDLKDHMRRAGDVCFSQVFR+G GTTGIVDYTNY+DMKYA++
Sbjct: 117 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAVK 167



 Score =  100 bits (249), Expect(2) = 3e-44
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = +1

Query: 1   FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGNGNSSSTDRHSNHXXXXXXXXXXXXV 180
           FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRG+   SS+DRHS++            V
Sbjct: 52  FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGH---SSSDRHSSY--SGSGGRGRGGV 106

Query: 181 SRRSDYRVMVSGLPS 225
           SRRS+YRV+V+GLPS
Sbjct: 107 SRRSEYRVVVTGLPS 121


>ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537641|gb|EEF39264.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 292

 Score =  101 bits (252), Expect(2) = 4e-44
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = +1

Query: 1   FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGNGNSSSTDRHSNHXXXXXXXXXXXXV 180
           FEEARDAEDAIRGRDGYDFDGH+LRVELAHGGRG+   SS+DRHS+H            V
Sbjct: 52  FEEARDAEDAIRGRDGYDFDGHQLRVELAHGGRGH---SSSDRHSSH----SGGGRGRGV 104

Query: 181 SRRSDYRVMVSGLPS 225
           SRRS+YRV+V+GLPS
Sbjct: 105 SRRSEYRVLVTGLPS 119



 Score =  101 bits (252), Expect(2) = 4e-44
 Identities = 45/51 (88%), Positives = 50/51 (98%)
 Frame = +2

Query: 305 SGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIR 457
           +GLPSSASWQDLKDHMRRAGDVCFSQVFR+G GTTGIVDYTNY+DMK+AI+
Sbjct: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIK 165


>ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|222844436|gb|EEE81983.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  103 bits (257), Expect(2) = 7e-44
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +2

Query: 305 SGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIR 457
           +GLPSSASWQDLKDHMRRAGDVCFSQVFR+G GTTGIVDYTNY+DMKYAI+
Sbjct: 115 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIK 165



 Score = 99.0 bits (245), Expect(2) = 7e-44
 Identities = 52/75 (69%), Positives = 59/75 (78%)
 Frame = +1

Query: 1   FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGNGNSSSTDRHSNHXXXXXXXXXXXXV 180
           FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRG+   SS+DRHS++             
Sbjct: 52  FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGH---SSSDRHSSY----SGGRGRGGA 104

Query: 181 SRRSDYRVMVSGLPS 225
           SRRS+YRV+V+GLPS
Sbjct: 105 SRRSEYRVVVTGLPS 119


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  103 bits (256), Expect(2) = 2e-43
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +2

Query: 305 SGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIR 457
           +GLPSSASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIR
Sbjct: 116 TGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166



 Score = 98.2 bits (243), Expect(2) = 2e-43
 Identities = 52/75 (69%), Positives = 58/75 (77%)
 Frame = +1

Query: 1   FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGNGNSSSTDRHSNHXXXXXXXXXXXXV 180
           FEE+RDAEDAIRGRDGYDFDGHRLRVELAHGGR  G+SSS DRHS+              
Sbjct: 52  FEESRDAEDAIRGRDGYDFDGHRLRVELAHGGR--GHSSSIDRHSH----SSGRGGRGGA 105

Query: 181 SRRSDYRVMVSGLPS 225
           SRRS+YRV+V+GLPS
Sbjct: 106 SRRSEYRVLVTGLPS 120


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