BLASTX nr result

ID: Angelica23_contig00019971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019971
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...    75   4e-12
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    70   2e-10
ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    70   2e-10
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    70   2e-10

>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 781

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +3

Query: 120 MAATKTSDVRYAPEDPTLPKPWRGLIEVKTGYIYFWNPE 236
           MAAT T+  RYAPEDPTLPKPWRGL++ KTGY+YFWNPE
Sbjct: 1   MAATATAGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 39


>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
           predicted protein [Populus trichocarpa]
          Length = 791

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
 Frame = +3

Query: 120 MAATKTSDV---RYAPEDPTLPKPWRGLIEVKTGYIYFWNPE 236
           MAAT T+     RYAPEDPTLPKPWRGL++ KTGY+YFWNPE
Sbjct: 1   MAATATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 42


>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
           sativus]
          Length = 778

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
 Frame = +3

Query: 120 MAATKTS---DVRYAPEDPTLPKPWRGLIEVKTGYIYFWNPE 236
           MAAT T+     RYAPEDPTLPKPWRGL++ KTGY+YFWNPE
Sbjct: 1   MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 42


>ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Cucumis sativus]
          Length = 785

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
 Frame = +3

Query: 120 MAATKTS---DVRYAPEDPTLPKPWRGLIEVKTGYIYFWNPE 236
           MAAT T+     RYAPEDPTLPKPWRGL++ KTGY+YFWNPE
Sbjct: 1   MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 42


>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
           [Vitis vinifera]
          Length = 828

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = +3

Query: 120 MAATKTSDVRYAPEDPTLPKPWRGLIEVKTGYIYFWNPE 236
           MAAT T   RYAPEDPTLPKPW+GL++ KTGY+YFWNPE
Sbjct: 1   MAATATGP-RYAPEDPTLPKPWKGLVDGKTGYLYFWNPE 38


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