BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019944
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containi...   138   7e-31
emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]   138   7e-31
ref|XP_002870941.1| pentatricopeptide repeat-containing protein ...   121   9e-26
ref|NP_195731.1| pentatricopeptide repeat-containing protein [Ar...   117   1e-24
ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23

>ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  138 bits (347), Expect = 7e-31
 Identities = 85/185 (45%), Positives = 117/185 (63%), Gaps = 5/185 (2%)
 Frame = +1

Query: 34  RKIYSMATQRLISQTPKITP----PFSTQLQSSTTHLLKTNPTKSNE-SKTTPLSHSFLI 198
           RK  S+ T+ L+S  P        P    L++STT     NP+   + +++T LS SFL 
Sbjct: 18  RKTSSLHTKTLLSSAPNPNSSYGIPALQTLETSTT----LNPSSVEDPNQSTSLSDSFLT 73

Query: 199 ENILLCLKQGTLNTHTNYLFQLNPCLYITVLDRCSTNLQMGQHFVDLIGRYHPKFKHXXX 378
           E +LL LKQG LN+  N LF+L+  + + VL +C  NLQ+GQ F+D I    P FKH   
Sbjct: 74  EKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQ 133

Query: 379 XXXAAVYVLFRSRRVSNAQALILRMVRKSGISRVEIVDCVVFGFRSFGFGCLGVFDLLVK 558
              A +++L RSRR+ +AQA+ILRMVRKSG+SRVEIV+ +V  + + G   L VFDLLV+
Sbjct: 134 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPL-VFDLLVR 192

Query: 559 SYVQA 573
           +YVQA
Sbjct: 193 TYVQA 197


>emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  138 bits (347), Expect = 7e-31
 Identities = 85/185 (45%), Positives = 117/185 (63%), Gaps = 5/185 (2%)
 Frame = +1

Query: 34  RKIYSMATQRLISQTPKITP----PFSTQLQSSTTHLLKTNPTKSNE-SKTTPLSHSFLI 198
           RK  S+ T+ L+S  P        P    L++STT     NP+   + +++T LS SFL 
Sbjct: 122 RKTSSLHTKTLLSSAPNPNSSYGIPALQTLETSTT----LNPSSVEDPNQSTSLSDSFLT 177

Query: 199 ENILLCLKQGTLNTHTNYLFQLNPCLYITVLDRCSTNLQMGQHFVDLIGRYHPKFKHXXX 378
           E +LL LKQG LN+  N LF+L+  + + VL +C  NLQ+GQ F+D I    P FKH   
Sbjct: 178 EKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQ 237

Query: 379 XXXAAVYVLFRSRRVSNAQALILRMVRKSGISRVEIVDCVVFGFRSFGFGCLGVFDLLVK 558
              A +++L RSRR+ +AQA+ILRMVRKSG+SRVEIV+ +V  + + G   L VFDLLV+
Sbjct: 238 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPL-VFDLLVR 296

Query: 559 SYVQA 573
           +YVQA
Sbjct: 297 TYVQA 301


>ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316778|gb|EFH47200.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 719

 Score =  121 bits (303), Expect = 9e-26
 Identities = 70/166 (42%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
 Frame = +1

Query: 82  KITPPFSTQLQSSTTHL--LKTNPTKSNESKTTPLSHSFLIENILLCLKQGTLNTHTNYL 255
           +I P   +++++  T    LKT  T S+ S +   S SFL+E I   LKQG  N   N+L
Sbjct: 5   RIIPSRISRVKNPLTRFKPLKTLATSSSSSASDSDSDSFLVEKICFSLKQGNSNVR-NHL 63

Query: 256 FQLNPCLYITVLDRCSTNLQMGQHFVDLIGRYHPKFKHXXXXXXAAVYVLFRSRRVSNAQ 435
            +LNP   + VL RC  +L +GQ FVD +G   P FKH      A +++L RS R+S+AQ
Sbjct: 64  IRLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQ 123

Query: 436 ALILRMVRKSGISRVEIVDCVVFGFRSFGFGCLGVFDLLVKSYVQA 573
           + +LRM+R+SG+SRVEIV+ +V  + + G     VFDLL++++VQA
Sbjct: 124 SCVLRMIRRSGVSRVEIVNSLVSTYSNCGSND-SVFDLLIRTFVQA 168


>ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g01110 gi|6759434|emb|CAB69839.1| putative protein
           [Arabidopsis thaliana] gi|28973740|gb|AAO64186.1|
           unknown protein [Arabidopsis thaliana]
           gi|110736884|dbj|BAF00399.1| hypothetical protein
           [Arabidopsis thaliana] gi|332002917|gb|AED90300.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 729

 Score =  117 bits (294), Expect = 1e-24
 Identities = 67/178 (37%), Positives = 104/178 (58%)
 Frame = +1

Query: 40  IYSMATQRLISQTPKITPPFSTQLQSSTTHLLKTNPTKSNESKTTPLSHSFLIENILLCL 219
           ++ +   R+     +  P  +    SS      ++ + S+ S +  +S SFL+E I   L
Sbjct: 3   VHRIIPSRVKDPLTRFKPLKNLTTSSSPVFEPSSSSSSSSSSASFSVSDSFLVEKICFSL 62

Query: 220 KQGTLNTHTNYLFQLNPCLYITVLDRCSTNLQMGQHFVDLIGRYHPKFKHXXXXXXAAVY 399
           KQG  N   N+L +LNP   + VL RC  +L +GQ FVD +G + P FKH      A ++
Sbjct: 63  KQGNNNVR-NHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIH 121

Query: 400 VLFRSRRVSNAQALILRMVRKSGISRVEIVDCVVFGFRSFGFGCLGVFDLLVKSYVQA 573
           +L RS R+S+AQ+ +LRM+R+SG+SR+EIV+ +   F + G     VFDLL+++YVQA
Sbjct: 122 ILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND-SVFDLLIRTYVQA 178


>ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  113 bits (283), Expect = 2e-23
 Identities = 69/164 (42%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
 Frame = +1

Query: 85  ITPPFSTQLQSSTTHLLKTNPTKSNESKTTPLSHSFLIENILLCLKQGTLNTHTNYLFQL 264
           I  P +T L+   TH     P   + S +   S SFL+E IL  LKQ  ++   + L +L
Sbjct: 41  IYSPSNTALRFLQTHSAPAPPHPVSSSLSP--SDSFLLEKILFTLKQNNVSYLRDSLLRL 98

Query: 265 NPCLYITVLDRCSTNLQMGQHFVDLIGRYHPKFKHXXXXXXAAVYVLFRSRRVSNAQALI 444
           +P L + VL RC  +L +G  F+ L+  + P FKH      A V+ L R RR+S AQA I
Sbjct: 99  SPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACI 158

Query: 445 LRMVRKSGISRVEIVDCVVFGFRSFGFGCLG-VFDLLVKSYVQA 573
           LRMVRKSG+SRV++V+ ++     F FG +G ++DLLV++YVQA
Sbjct: 159 LRMVRKSGVSRVKVVESLI--STCFYFGSVGLIYDLLVRTYVQA 200