BLASTX nr result

ID: Angelica23_contig00019784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019784
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   102   2e-20
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   102   2e-20
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arab...    92   4e-17
ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabido...    90   2e-16

>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
           vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
           product [Vitis vinifera]
          Length = 489

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -3

Query: 307 MEEEQLT-RDFPLFSVKRXXXXXXXXXXXXXXTSKHQILKETSTNPNL-SSSFSQLGLSD 134
           M+EE L   +FPLFS ++                  +     +TNP   SS+F+ LGL++
Sbjct: 1   MDEETLVDENFPLFSKRKPTPKPSKNSTTTAQNPNPEQPLTRTTNPTSPSSTFADLGLAE 60

Query: 133 WALQTCKELGLKSPTPVQHSCIPRIIAGDDVLGIAQTGSGKTAA 2
           WA+Q CKELG++ PTPVQH CIPRI+AGDDVLG+AQTGSGKTAA
Sbjct: 61  WAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAA 104


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -3

Query: 307 MEEEQLT-RDFPLFSVKRXXXXXXXXXXXXXXTSKHQILKETSTNPNL-SSSFSQLGLSD 134
           M+EE L   +FPLFS ++                  +     +TNP   SS+F+ LGL++
Sbjct: 104 MDEETLVDENFPLFSKRKPTPKPSKNSTTTAQNPNPEQPLTRTTNPTSPSSTFADLGLAE 163

Query: 133 WALQTCKELGLKSPTPVQHSCIPRIIAGDDVLGIAQTGSGKTAA 2
           WA+Q CKELG++ PTPVQH CIPRI+AGDDVLG+AQTGSGKTAA
Sbjct: 164 WAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAA 207


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/115 (47%), Positives = 69/115 (60%), Gaps = 13/115 (11%)
 Frame = -3

Query: 307 MEEEQLTR------DFPLFSVKRXXXXXXXXXXXXXXTSKHQILKETSTNPNLSSS---- 158
           MEE+Q  +      +FPLFS                     ++ KE S+NP+   S    
Sbjct: 1   MEEQQQEKTHVVDSNFPLFSKTPKRPKLQKTQNPDESPEIPKLEKEASSNPSNPDSAAAK 60

Query: 157 ---FSQLGLSDWALQTCKELGLKSPTPVQHSCIPRIIAGDDVLGIAQTGSGKTAA 2
              FS LGLS+WALQTCKELG+K+PT VQ  CIP+I++G DVLG+AQTGSGKTAA
Sbjct: 61  TTLFSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAA 115


>ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
           lyrata] gi|297338742|gb|EFH69159.1| hypothetical protein
           ARALYDRAFT_471825 [Arabidopsis lyrata subsp. lyrata]
          Length = 487

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = -3

Query: 202 QILKETSTNPNLSSSFSQLGLSDWALQTCKELGLKSPTPVQHSCIPRIIAGDDVLGIAQT 23
           Q  K T+ NP+  ++F  LGL++WA++TCKELG++ PTPVQ  C+P+I+AG DVLG+AQT
Sbjct: 41  QFEKFTNPNPSPVANFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQT 100

Query: 22  GSGKTAA 2
           GSGKTAA
Sbjct: 101 GSGKTAA 107


>ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
           gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 36
           gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612
           DEAD-box protein (dbp45A) from Drosophila melanogaster
           and is a member of PF|00270 DEAD/DEAH box helicase
           family [Arabidopsis thaliana]
           gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA
           helicase 36 [Arabidopsis thaliana]
          Length = 491

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 6/69 (8%)
 Frame = -3

Query: 190 ETSTNPNLSS------SFSQLGLSDWALQTCKELGLKSPTPVQHSCIPRIIAGDDVLGIA 29
           E  TNPN SS      +F  LGL++WA++TCKELG++ PTPVQ  C+P+I+AG DVLG+A
Sbjct: 43  EKFTNPNPSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLA 102

Query: 28  QTGSGKTAA 2
           QTGSGKTAA
Sbjct: 103 QTGSGKTAA 111


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