BLASTX nr result

ID: Angelica23_contig00019647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019647
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ...   138   4e-31
ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein o...   137   9e-31
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   137   9e-31
ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein o...   137   9e-31
ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein o...   137   9e-31

>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
           [Ginkgo biloba]
          Length = 270

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 3   FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 182
           FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS
Sbjct: 96  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 155

Query: 183 LVHAQS 200
           L+HAQS
Sbjct: 156 LIHAQS 161


>ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 3   FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 182
           FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPS
Sbjct: 91  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150

Query: 183 LVHAQS 200
           LVHAQS
Sbjct: 151 LVHAQS 156


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 3   FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 182
           FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPS
Sbjct: 93  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152

Query: 183 LVHAQS 200
           LVHAQS
Sbjct: 153 LVHAQS 158


>ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 3   FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 182
           FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPS
Sbjct: 91  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150

Query: 183 LVHAQS 200
           LVHAQS
Sbjct: 151 LVHAQS 156


>ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like isoform 1 [Cucumis sativus]
           gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 3 [Cucumis sativus]
          Length = 265

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 3   FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 182
           FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPS
Sbjct: 91  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150

Query: 183 LVHAQS 200
           LVHAQS
Sbjct: 151 LVHAQS 156


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