BLASTX nr result

ID: Angelica23_contig00019554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019554
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]             108   3e-22
dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris] ...   108   6e-22
ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group] g...   105   4e-21
gb|ACR38140.1| unknown [Zea mays] gi|414873814|tpg|DAA52371.1| T...   103   1e-20
ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays...   103   1e-20

>gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
          Length = 202

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/108 (53%), Positives = 70/108 (64%)
 Frame = +1

Query: 61  MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKSSXXXXXXXXXXXXXXXX 240
           M++++EYRCFIGNLSWSTSDR LKDAF+KFG L+DAKVV+DK S                
Sbjct: 1   MSEEDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTF----- 55

Query: 241 VVMDKXXXXXXXXXXXXXDEEKAMEDAIEAMNGIDLDGRPISVDKAQP 384
                             D+++AMEDAIEAMNG+DLDGR I+VDKAQP
Sbjct: 56  ------------------DDKRAMEDAIEAMNGMDLDGRAITVDKAQP 85


>dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
           gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1
           [Nicotiana sylvestris]
          Length = 209

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/108 (56%), Positives = 69/108 (63%)
 Frame = +1

Query: 61  MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKSSXXXXXXXXXXXXXXXX 240
           MAD +EYRCFIGNLSWSTSDR LKDAF+KFG L+DAKVV+DK S                
Sbjct: 1   MAD-DEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTF----- 54

Query: 241 VVMDKXXXXXXXXXXXXXDEEKAMEDAIEAMNGIDLDGRPISVDKAQP 384
                             DE++AMEDAIEAMNG+DLDGR I+VDKAQP
Sbjct: 55  ------------------DEKRAMEDAIEAMNGVDLDGRDITVDKAQP 84


>ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
           gi|40714682|gb|AAR88588.1| putative RNA binding protein
           [Oryza sativa Japonica Group]
           gi|108711961|gb|ABF99756.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711962|gb|ABF99757.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711963|gb|ABF99758.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711964|gb|ABF99759.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa
           Japonica Group] gi|125546344|gb|EAY92483.1| hypothetical
           protein OsI_14220 [Oryza sativa Indica Group]
           gi|125588547|gb|EAZ29211.1| hypothetical protein
           OsJ_13272 [Oryza sativa Japonica Group]
           gi|215695067|dbj|BAG90258.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215715212|dbj|BAG94963.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764998|dbj|BAG86695.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 205

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/108 (54%), Positives = 64/108 (59%)
 Frame = +1

Query: 61  MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKSSXXXXXXXXXXXXXXXX 240
           MAD EEYRCFIGNLSWST+D  LKDAF KFG L +AKVV DK S                
Sbjct: 1   MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTF----- 55

Query: 241 VVMDKXXXXXXXXXXXXXDEEKAMEDAIEAMNGIDLDGRPISVDKAQP 384
                             DE+KAMEDAIE MNG+DLDGR I+VDKAQP
Sbjct: 56  ------------------DEKKAMEDAIEGMNGLDLDGRAITVDKAQP 85


>gb|ACR38140.1| unknown [Zea mays] gi|414873814|tpg|DAA52371.1| TPA: glycine-rich
           RNA-binding protein 8 isoform 1 [Zea mays]
           gi|414873815|tpg|DAA52372.1| TPA: glycine-rich
           RNA-binding protein 8 isoform 2 [Zea mays]
           gi|414873816|tpg|DAA52373.1| TPA: glycine-rich
           RNA-binding protein 8 isoform 3 [Zea mays]
          Length = 205

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/108 (52%), Positives = 65/108 (60%)
 Frame = +1

Query: 61  MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKSSXXXXXXXXXXXXXXXX 240
           MAD +EYRCFIGNLSWST+D  LKDAF KFG L +AKVV+DK S                
Sbjct: 1   MADVDEYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTF----- 55

Query: 241 VVMDKXXXXXXXXXXXXXDEEKAMEDAIEAMNGIDLDGRPISVDKAQP 384
                             DE++AMEDAIE MNG+DLDGR I+VDKAQP
Sbjct: 56  ------------------DEKQAMEDAIEGMNGLDLDGRNITVDKAQP 85


>ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
           gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding
           protein 8 [Zea mays]
          Length = 198

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/108 (52%), Positives = 65/108 (60%)
 Frame = +1

Query: 61  MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKSSXXXXXXXXXXXXXXXX 240
           MAD +EYRCFIGNLSWST+D  LKDAF KFG L +AKVV+DK S                
Sbjct: 1   MADVDEYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTF----- 55

Query: 241 VVMDKXXXXXXXXXXXXXDEEKAMEDAIEAMNGIDLDGRPISVDKAQP 384
                             DE++AMEDAIE MNG+DLDGR I+VDKAQP
Sbjct: 56  ------------------DEKQAMEDAIEGMNGLDLDGRNITVDKAQP 85


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