BLASTX nr result
ID: Angelica23_contig00019536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00019536
(775 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACA61784.1| SKP1-like protein 2 [Petunia x hybrida] gi|253796... 88 2e-15
gb|ABB77427.1| Skp1-like protein 2 [Petunia integrifolia subsp. ... 88 2e-15
ref|NP_565123.1| S-phase kinase-associated protein 1 [Arabidopsi... 87 4e-15
ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arab... 87 5e-15
ref|XP_002437413.1| hypothetical protein SORBIDRAFT_10g026480 [S... 86 7e-15
>gb|ACA61784.1| SKP1-like protein 2 [Petunia x hybrida] gi|253796268|gb|ACT35738.1|
SKP1-like 1 [Petunia x hybrida]
Length = 154
Score = 88.2 bits (217), Expect = 2e-15
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Frame = +2
Query: 203 AKKVVVQCDGDGSSSRIIIEMKVALQSKVIAQLMRPALLANLEEIVVVLPDIRFSTLLKV 382
A+K++V DG + ++ E VA++S+ I ++ + + + LP++ L KV
Sbjct: 2 AEKMIVLKSSDGETFQV--EESVAVESQTIKHMIED----DCADSSIPLPNVTSQILAKV 55
Query: 383 INYCTLHAEQS--------EDLDAFDAKFVHVDPAELFLITHAANYLKIRTLMDLTCGAL 538
I YC H E S +DL +FDA FV VD + LF + AANYL I++L+DLTC +
Sbjct: 56 IEYCKRHVEASKSEDKATEDDLKSFDADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTV 115
Query: 539 SNKIKGKTPEEIEE 580
++ IKGKTPEEI +
Sbjct: 116 ADMIKGKTPEEIRK 129
>gb|ABB77427.1| Skp1-like protein 2 [Petunia integrifolia subsp. inflata]
Length = 154
Score = 87.8 bits (216), Expect = 2e-15
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Frame = +2
Query: 203 AKKVVVQCDGDGSSSRIIIEMKVALQSKVIAQLMRPALLANLEEIVVVLPDIRFSTLLKV 382
A+K++V DG + ++ E VA++S+ I ++ + + + LP++ L KV
Sbjct: 2 AEKMIVLKSSDGETFQV--EESVAVESQTIKHMIED----DCADSSIPLPNVTSQILAKV 55
Query: 383 INYCTLHAEQS--------EDLDAFDAKFVHVDPAELFLITHAANYLKIRTLMDLTCGAL 538
I YC H E S +DL +FDA FV VD + LF + AANYL I++L+DLTC +
Sbjct: 56 IEYCKRHVEASKTEDKATEDDLKSFDADFVKVDQSMLFDLILAANYLNIKSLLDLTCQTV 115
Query: 539 SNKIKGKTPEEIEE 580
++ IKGKTPEEI +
Sbjct: 116 ADMIKGKTPEEIRK 129
>ref|NP_565123.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|71153764|sp|Q39255.1|SKP1A_ARATH RecName:
Full=SKP1-like protein 1A; Short=SKP1-like 1; AltName:
Full=UFO-binding protein 1 gi|146387657|pdb|2P1M|A Chain
A, Tir1-ask1 Complex Structure gi|146387659|pdb|2P1N|A
Chain A, Mechanism Of Auxin Perception By The Tir1
Ubiqutin Ligase gi|146387662|pdb|2P1N|D Chain D,
Mechanism Of Auxin Perception By The Tir1 Ubiqutin
Ligase gi|146387665|pdb|2P1O|A Chain A, Mechanism Of
Auxin Perception By The Tir1 Ubiquitin Ligase
gi|146387668|pdb|2P1P|A Chain A, Mechanism Of Auxin
Perception By The Tir1 Ubiquitin Ligase
gi|146387670|pdb|2P1Q|A Chain A, Mechanism Of Auxin
Perception By The Tir1 Ubiquitin Ligase
gi|185177933|pdb|3C6N|A Chain A, Small Molecule Agonists
And Antagonists Of F-Box Protein- Substrate Interactions
In Auxin Perception And Signaling
gi|185177935|pdb|3C6O|A Chain A, Small Molecule Agonists
And Antagonists Of F-Box Protein-Substrate Interactions
In Auxin Perception And Signaling
gi|185177937|pdb|3C6P|A Chain A, Small Molecule Agonists
And Antagonists Of F-Box Protein- Substrate Interactions
In Auxin Perception And Signaling
gi|308388069|pdb|3OGK|A Chain A, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388072|pdb|3OGK|C Chain C, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388075|pdb|3OGK|E Chain E, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388078|pdb|3OGK|G Chain G, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388080|pdb|3OGK|I Chain I, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388083|pdb|3OGK|K Chain K, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388086|pdb|3OGK|M Chain M, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388089|pdb|3OGK|O Chain O, Structure Of Coi1-Ask1
In Complex With Coronatine And An Incomplete Jaz1 Degron
gi|308388092|pdb|3OGL|A Chain A, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388095|pdb|3OGL|C Chain C, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388098|pdb|3OGL|E Chain E, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388101|pdb|3OGL|G Chain G, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388103|pdb|3OGL|I Chain I, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388106|pdb|3OGL|K Chain K, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388109|pdb|3OGL|M Chain M, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388112|pdb|3OGL|O Chain O, Structure Of Coi1-Ask1
In Complex With Ja-Isoleucine And The Jaz1 Degron
gi|308388115|pdb|3OGM|A Chain A, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388118|pdb|3OGM|C Chain C, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388121|pdb|3OGM|E Chain E, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388124|pdb|3OGM|G Chain G, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388126|pdb|3OGM|I Chain I, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388129|pdb|3OGM|K Chain K, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388132|pdb|3OGM|M Chain M, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|308388135|pdb|3OGM|O Chain O, Structure Of Coi1-Ask1
In Complex With Coronatine And The Jaz1 Degron
gi|6721107|gb|AAF26761.1|AC007396_10 T4O12.17
[Arabidopsis thaliana] gi|1432083|gb|AAB17535.1| homolog
to Skp1p, an evolutionarily conserved kinetochore
protein in budding yeast [Arabidopsis thaliana]
gi|3068807|gb|AAC14444.1| Skp1 homolog [Arabidopsis
thaliana] gi|3719209|gb|AAC63109.1| UIP1 [Arabidopsis
thaliana] gi|19424110|gb|AAL87354.1| putative SKP1/ASK1
protein At1 [Arabidopsis thaliana]
gi|21281127|gb|AAM45019.1| putative SKP1/ASK1 protein
At1 [Arabidopsis thaliana] gi|332197659|gb|AEE35780.1|
S-phase kinase-associated protein 1 [Arabidopsis
thaliana]
Length = 160
Score = 87.0 bits (214), Expect = 4e-15
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
Frame = +2
Query: 203 AKKVVVQCDGDGSSSRIIIEMKVALQSKVIAQLMRPALLANLEEIVVVLPDIRFSTLLKV 382
AKK+V++ DG S + E VAL+S+ IA ++ + N V LP++ L KV
Sbjct: 3 AKKIVLK-SSDGESFEV--EEAVALESQTIAHMVEDDCVDN----GVPLPNVTSKILAKV 55
Query: 383 INYCTLHAEQS--------------EDLDAFDAKFVHVDPAELFLITHAANYLKIRTLMD 520
I YC H E + +DL A+DA F+ +D A LF + AANYL I+ L+D
Sbjct: 56 IEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLD 115
Query: 521 LTCGALSNKIKGKTPEEI 574
LTC +++ IKGKTPEEI
Sbjct: 116 LTCQTVADMIKGKTPEEI 133
>ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata] gi|297333463|gb|EFH63881.1| hypothetical protein
ARALYDRAFT_339769 [Arabidopsis lyrata subsp. lyrata]
Length = 703
Score = 86.7 bits (213), Expect = 5e-15
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Frame = +2
Query: 203 AKKVVVQCDGDGSSSRIIIEMKVALQSKVIAQLMRPALLANLEEIVVVLPDIRFSTLLKV 382
+KK+V++ DG S + E VAL+S+ IA ++ + N V LP++ L KV
Sbjct: 3 SKKIVLK-SSDGESFEV--EEAVALESQTIAHMVEDDCVDN----GVPLPNVTSKILAKV 55
Query: 383 INYCTLHAE-------------QSEDLDAFDAKFVHVDPAELFLITHAANYLKIRTLMDL 523
I YC H E EDL A+D +F+ +D A LF + AANYL I+ L+DL
Sbjct: 56 IEYCKKHVEVAAAKSEAVDGATSDEDLKAWDTEFMKIDQATLFELILAANYLNIKNLLDL 115
Query: 524 TCGALSNKIKGKTPEEI 574
TC +++ IKGKTPEEI
Sbjct: 116 TCQTVADMIKGKTPEEI 132
>ref|XP_002437413.1| hypothetical protein SORBIDRAFT_10g026480 [Sorghum bicolor]
gi|241915636|gb|EER88780.1| hypothetical protein
SORBIDRAFT_10g026480 [Sorghum bicolor]
Length = 173
Score = 86.3 bits (212), Expect = 7e-15
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Frame = +2
Query: 182 TTMSSSCAKKVVVQCDGDGSSSRIIIEMKVALQSKVIAQLMRPALLANLEEIVVVLPDIR 361
++ SSS +K +V D +R + AL SK + +++ A + ++LP++
Sbjct: 11 SSSSSSGEEKTIVLVSSD-IRARFEVREAAALLSKTVRRMIDEAGADASGDDGILLPEVD 69
Query: 362 FSTLLKVINYCTLHAEQS-------EDLDAFDAKFVHVDPAELFLITHAANYLKIRTLMD 520
TL KV+ YC HA EDL+ FD +F+HVD L+ +T A++YLKI L++
Sbjct: 70 AKTLAKVLEYCNKHAPAGSSSSAAEEDLERFDREFMHVDLGTLYSLTTASSYLKIEGLLN 129
Query: 521 LTCGALSNKIKGKTPEEIEE 580
LTC +++ IKGKTPE+I +
Sbjct: 130 LTCKTIADMIKGKTPEQIRK 149