BLASTX nr result

ID: Angelica23_contig00019518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019518
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   124   6e-27
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    94   1e-17
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]                93   3e-17
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]    92   3e-17
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]           92   3e-17

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/101 (64%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   GNVKLVFTSGKCILLNNVLFVPGIRKNLLSGVVLNNCGYKQVYESDKYILSKHGTFVGFG 181
           G V L F+SGK + LN+V+ VPGIRKNL+SG VLN CG+KQVYESDKY+LSK G FVGFG
Sbjct: 310 GKVVLEFSSGKTLDLNDVIHVPGIRKNLVSGSVLNKCGFKQVYESDKYVLSKCGVFVGFG 369

Query: 182 YLCNGMFMLNVNTPFNDESACMASTSTSNNLNKPELWHARL 304
           Y CNGMFMLN+N   N  S  MA +S     N   LWHARL
Sbjct: 370 YFCNGMFMLNINKVVN--SIYMACSSK----NDTSLWHARL 404


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/101 (52%), Positives = 68/101 (67%)
 Frame = +2

Query: 2   GNVKLVFTSGKCILLNNVLFVPGIRKNLLSGVVLNNCGYKQVYESDKYILSKHGTFVGFG 181
           G V L  TSGK + L NVL+VP IRKNL+SG +LNN G++ V+ES+K++LSK G +VG G
Sbjct: 379 GKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKG 438

Query: 182 YLCNGMFMLNVNTPFNDESACMASTSTSNNLNKPELWHARL 304
           Y+ +GM+ LNV T     +   ASTST   L    LWH RL
Sbjct: 439 YMSDGMWKLNVMTIIK-SNMNKASTST-YMLESSNLWHGRL 477


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   GNVKLVFTSGKCILLNNVLFVPGIRKNLLSGVVLNNCGYKQVYESDKYILSKHGTFVGFG 181
           G+V+L FTSG+ + L +VL+ P +RK L+S  +LN  G+KQ+ ES++Y++ K G FVG G
Sbjct: 353 GDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQIIESNQYVIVKKGIFVGKG 412

Query: 182 YLCNGMFMLNVNTPFNDESACMASTSTS-NNLNKPELWHARL 304
           Y C+GMF LNV          M  TSTS   L+    WHARL
Sbjct: 413 YACDGMFKLNVE---------MNKTSTSVYMLSSTNFWHARL 445


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/101 (48%), Positives = 64/101 (63%)
 Frame = +2

Query: 2   GNVKLVFTSGKCILLNNVLFVPGIRKNLLSGVVLNNCGYKQVYESDKYILSKHGTFVGFG 181
           G +++VFTSGK + L NVL+VP + KNL+SG +L   G K V+ES K IL+K G FVG G
Sbjct: 350 GTIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKG 409

Query: 182 YLCNGMFMLNVNTPFNDESACMASTSTSNNLNKPELWHARL 304
           Y C+GM  L+ N   N  ++  A    SN+L    LWH RL
Sbjct: 410 YSCDGMIKLSTNDNINKMTSTSAYMCDSNSL---XLWHNRL 447


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   GNVKLVFTSGKCILLNNVLFVPGIRKNLLSGVVLNNCGYKQVYESDKYILSKHGTFVGFG 181
           G V L  TSGK + LNNVL+VP IRKNL+SG +LN  G++ V+ESD  +LSK+G +VG G
Sbjct: 368 GKVALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKG 427

Query: 182 YLCNGMFMLNVNT--PFNDESACMASTSTSNNLNKPELWHARL 304
           Y+ +G+F LNV T  P  +  A    TS++  L    +WH RL
Sbjct: 428 YVNDGLFKLNVMTLKPTINNKA----TSSAYLLESSNIWHGRL 466


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