BLASTX nr result

ID: Angelica23_contig00019517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019517
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   144   8e-33
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]   105   3e-21
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]           98   6e-19
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    98   8e-19
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]    97   2e-18

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  144 bits (363), Expect = 8e-33
 Identities = 68/94 (72%), Positives = 75/94 (79%)
 Frame = -1

Query: 284 HARLGHVHYKRIKDMSKMSLIPAIVLNNEKCKTCMLTKITRMPFKDANRVSDVLELIHSD 105
           HARLGHVHYK + +MSK  LIP   +N EKC+TCMLTKI R PFK   R S VLELIHSD
Sbjct: 401 HARLGHVHYKGMIEMSKEGLIPTFDVNIEKCRTCMLTKIIRQPFKSIERNSKVLELIHSD 460

Query: 104 LCDFHSTPSLGNKKYVVTFIDDASRYCYVYLLHA 3
           LCD H+T SLGNKKY +TFIDD SR+CYVYLLHA
Sbjct: 461 LCDIHATSSLGNKKYFITFIDDYSRFCYVYLLHA 494


>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
          Length = 487

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
 Frame = -1

Query: 284 HARLGHVHYKRIKDMSKMSLIPAIVLNN-EKCKTCMLTKITRMPFKDANRVSDVLELIHS 108
           H+RLGHV+Y  +  M+ + L+    +N  +KC+ C+ +K  R PFK   R S++LEL+HS
Sbjct: 199 HSRLGHVNYHSMYKMANLGLLLKFDINETQKCEICVESKFARKPFKSIERSSELLELVHS 258

Query: 107 DLCDFHSTPSLGNKKYVVTFIDDASRYCYVYLLHA 3
           DLCD   TP+ G  KY +TFIDD SR+CYVYLLH+
Sbjct: 259 DLCDLKMTPTRGGIKYFITFIDDYSRFCYVYLLHS 293


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = -1

Query: 284 HARLGHVHYKRIKDMSKMSLIPAIVLN-NEKCKTCMLTKITRMPFKDANRVSDVLELIHS 108
           H RLGHV++  ++ +  M  IP   ++   KCKTC+  K+TR  F+   R S+ L+LIHS
Sbjct: 463 HGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRSSFQIIQRNSEPLDLIHS 522

Query: 107 DLCDFHSTPSLGNKKYVVTFIDDASRYCYVYLL 9
           D+CDF S  + G  KY +TFIDD ++YCYVYLL
Sbjct: 523 DICDFKSIQTRGGNKYFITFIDDCTKYCYVYLL 555


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = -1

Query: 284 HARLGHVHYKRIKDMSKMSLIPAIVLN-NEKCKTCMLTKITRMPFKDANRVSDVLELIHS 108
           H RLGHV+Y  ++ +  ++ IP   +N N KC+TC+  K+TR  F+   R ++ L+LIHS
Sbjct: 474 HGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHS 533

Query: 107 DLCDFHSTPSLGNKKYVVTFIDDASRYCYVYLL 9
           D+CD     + G  KY +TF+DD+++YCYVYLL
Sbjct: 534 DICDLKFVQTRGGNKYFITFVDDSTKYCYVYLL 566


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = -1

Query: 284 HARLGHVHYKRIKDMSKMSLIPAIVLN-NEKCKTCMLTKITRMPFKDANRVSDVLELIHS 108
           H RLGHV+Y  +  +  +  +P   ++ N KC+TC+ +K+T++PF    R ++ L+L HS
Sbjct: 603 HGRLGHVNYDTLCRLIHLDYLPKFNIDPNHKCETCVESKLTKVPFHSVERSTEPLDLFHS 662

Query: 107 DLCDFHSTPSLGNKKYVVTFIDDASRYCYVYLL 9
           D+CD     + G KKY +TFIDD +RYCYVYLL
Sbjct: 663 DICDLKFVQTRGGKKYFITFIDDCTRYCYVYLL 695


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