BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019461
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-64
ref|XP_002863397.1| pentatricopeptide repeat-containing protein ...   248   3e-64
ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containi...   245   2e-63
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar...   243   1e-62
ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containi...   241   6e-62

>ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Glycine max]
          Length = 712

 Score =  249 bits (635), Expect = 2e-64
 Identities = 116/153 (75%), Positives = 136/153 (88%)
 Frame = +3

Query: 3   NGVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEE 182
           NGV LDNITYSTII+CAK+CNLYDKA+ WFERMYKTGLMPDEVTYSA+LDVY +L +VEE
Sbjct: 218 NGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEE 277

Query: 183 VVSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVEVEPDLFLYNTLFE 362
           V+SLYERGRA+GWKPD + FSVLGK+F +AGDYDG+RYVFQEM++V V+P+L +YNTL E
Sbjct: 278 VISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLE 337

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
           A+ KA KPG A+GLF  MI SGI PNEKTLTA+
Sbjct: 338 AMGKAGKPGFARGLFEEMIESGIVPNEKTLTAV 370



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
 Frame = +3

Query: 6   GVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEEV 185
           GV+ + + Y+T++    +      A   FE M ++G++P+E T +AV+ +YGK R   + 
Sbjct: 324 GVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDA 383

Query: 186 VSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMK-AVEVEPDLFLYNTLFE 362
           + L++R + +GW  D + ++ L  + A  G  +    +F++MK +V  +PD + Y  +  
Sbjct: 384 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLN 443

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
                     A  LF  M   G++ N    T L
Sbjct: 444 IYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCL 476



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
 Frame = +3

Query: 3   NGVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEE 182
           +G+  +  T + +I    +      A+E ++RM + G   D + Y+ +L++   +  VEE
Sbjct: 358 SGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 417

Query: 183 VVSLYERGRAS-GWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVEVEPDLFLYNTLF 359
             +L+   + S   KPDS +++ +  ++   GD D    +F EM  + VE ++  +  L 
Sbjct: 418 AETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLI 477

Query: 360 EALIKAIKPGLAKGLFGSMISSGIKPNEK 446
           + L +A++      +F   +  GIKP+++
Sbjct: 478 QCLGRAMEFDDLVRVFDISVERGIKPDDR 506


>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309232|gb|EFH39656.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 711

 Score =  248 bits (634), Expect = 3e-64
 Identities = 115/153 (75%), Positives = 138/153 (90%)
 Frame = +3

Query: 3   NGVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEE 182
           +GVELDNITYSTIITCAKRCN YDKAIEWFERMYKTGLMPDEVTYSA+LDVY KLR+VEE
Sbjct: 215 DGVELDNITYSTIITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLRKVEE 274

Query: 183 VVSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVEVEPDLFLYNTLFE 362
           V+SLYER  A+GWKPD++AFSVLGK+F +AGDYDG+RYV QEMK+++V+P++ +YNTL E
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
           A+ +A KPGLA+ LF  M+ +G+ PNEKTLTAL
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
 Frame = +3

Query: 24  ITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEEVVSLYER 203
           + Y+T++    R      A   F  M + GL P+E T +A++ +YGK R  ++ + L+E 
Sbjct: 327 VVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEE 386

Query: 204 GRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMK-AVEVEPDLFLYNTLFEALIKAI 380
            +A  W  D + ++ L  + A  G  +    +F +MK +V+ +PD F Y  +        
Sbjct: 387 MKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGG 446

Query: 381 KPGLAKGLFGSMISSGIKPNEKTLTAL 461
           K   A  LF  M+ +G++ N    T L
Sbjct: 447 KAEKAMKLFEEMLEAGVQVNVMGCTCL 473


>ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic [Vitis vinifera]
          Length = 723

 Score =  245 bits (626), Expect = 2e-63
 Identities = 115/152 (75%), Positives = 136/152 (89%)
 Frame = +3

Query: 6   GVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEEV 185
           GVELDNITYSTIITCAKRCNL+DKA++WFERMYKTGLMPDEVTYSA+LDVY KL +VEEV
Sbjct: 229 GVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEV 288

Query: 186 VSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVEVEPDLFLYNTLFEA 365
           +SLYERGRASGWKPD +AF+VLGK+F +AGDYDG+RYV QEMK++ V+P+L +YNTL EA
Sbjct: 289 LSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEA 348

Query: 366 LIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
           + KA KPGLA+ LF  M+ SG+ P+ KTLTAL
Sbjct: 349 MGKAGKPGLARSLFEEMVGSGVIPDAKTLTAL 380



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
 Frame = +3

Query: 6   GVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEEV 185
           GV+ + + Y+T++    +      A   FE M  +G++PD  T +A++ +YGK R   + 
Sbjct: 334 GVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDA 393

Query: 186 VSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVE-VEPDLFLYNTLFE 362
           + L+ER R++GW  D + ++ L  + A  G  +    +F++MK  E   PD + Y  +  
Sbjct: 394 LELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLN 453

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
                     A  LF  M   G++ N    T L
Sbjct: 454 IYGSGGNVDRAMQLFDEMSELGVQINVMGCTCL 486


>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g46580, chloroplastic; Flags: Precursor
           gi|8885599|dbj|BAA97529.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 711

 Score =  243 bits (620), Expect = 1e-62
 Identities = 113/153 (73%), Positives = 137/153 (89%)
 Frame = +3

Query: 3   NGVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEE 182
           +GVELDNITYSTIITCAKRCNLY+KAIEWFERMYKTGLMPDEVTYSA+LDVY K  +VEE
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274

Query: 183 VVSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVEVEPDLFLYNTLFE 362
           V+SLYER  A+GWKPD++AFSVLGK+F +AGDYDG+RYV QEMK+++V+P++ +YNTL E
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
           A+ +A KPGLA+ LF  M+ +G+ PNEKTLTAL
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
 Frame = +3

Query: 24  ITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEEVVSLYER 203
           + Y+T++    R      A   F  M + GL P+E T +A++ +YGK R   + + L+E 
Sbjct: 327 VVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386

Query: 204 GRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMK-AVEVEPDLFLYNTLFEALIKAI 380
            +A  W  D + ++ L  + A  G  +    +F +MK +V+  PD F Y  +        
Sbjct: 387 MKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGG 446

Query: 381 KPGLAKGLFGSMISSGIKPNEKTLTAL 461
           K   A  LF  M+ +G++ N    T L
Sbjct: 447 KAEKAMELFEEMLKAGVQVNVMGCTCL 473


>ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/153 (73%), Positives = 133/153 (86%)
 Frame = +3

Query: 3   NGVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEE 182
           NGV LDNITYSTII+CAK+CNLYDKA+ WFERMYKT LMPDEVTYSA+LDVY +L +VEE
Sbjct: 218 NGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKVEE 277

Query: 183 VVSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMKAVEVEPDLFLYNTLFE 362
           V+SLYERGRA+GWKPD + FSVLGK+F +AGDYDG+RYVFQEM++V V+P+L +YNTL E
Sbjct: 278 VISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLE 337

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
           A+ KA KP  A+GLF  MI  GI PNEKTLTA+
Sbjct: 338 AMGKAGKPVFARGLFEEMIELGIVPNEKTLTAV 370



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
 Frame = +3

Query: 6   GVELDNITYSTIITCAKRCNLYDKAIEWFERMYKTGLMPDEVTYSAVLDVYGKLRRVEEV 185
           GV+ + + Y+T++    +      A   FE M + G++P+E T +AV+ +YGK R   + 
Sbjct: 324 GVQPNLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDA 383

Query: 186 VSLYERGRASGWKPDSVAFSVLGKLFAQAGDYDGVRYVFQEMK-AVEVEPDLFLYNTLFE 362
           + L++R + +GW  D + ++ L  + A  G  +    +F++MK +   +PD + Y  +  
Sbjct: 384 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLN 443

Query: 363 ALIKAIKPGLAKGLFGSMISSGIKPNEKTLTAL 461
                     A  LF  M  SG++ N    T L
Sbjct: 444 IYGSQGDVDKAMKLFNEMCKSGVELNVMGFTCL 476