BLASTX nr result

ID: Angelica23_contig00019448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019448
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525743.1| PREDICTED: uncharacterized protein LOC100807...   122   4e-26
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   121   7e-26
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...   120   1e-25
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   119   3e-25
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...   115   8e-25

>ref|XP_003525743.1| PREDICTED: uncharacterized protein LOC100807389 [Glycine max]
          Length = 1732

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/127 (44%), Positives = 82/127 (64%)
 Frame = -2

Query: 419  RYNPHTFFDDCGFPQYRRRRQHNTVKRKGVFVDNQYVVPYNRDLLTQFHYHINLEVCNNS 240
            ++ P T  D  G+P YRRR   +++ + GV + N+YVVPYN  LL ++  HIN+E CN S
Sbjct: 887  QFQPQTLLDSNGYPVYRRRNNGHSISKNGVIIGNRYVVPYNPKLLKKYRAHINIEWCNQS 946

Query: 239  RSLKYLFKYCLKGHDTATMILKKKEKNPTESATKDQKKRHDEIKHYLDGRYVCVVEAAWR 60
             S+KYLFKY  KG+D  T ++     + +++A ++   ++DE+K YLD RY+   EAAWR
Sbjct: 947  TSIKYLFKYINKGYDRVTTVM----LSDSDNAAQNVNIQNDELKEYLDCRYISPCEAAWR 1002

Query: 59   HFGFDIH 39
             F F IH
Sbjct: 1003 IFAFPIH 1009


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/141 (46%), Positives = 82/141 (58%), Gaps = 7/141 (4%)
 Frame = -2

Query: 437 CYLSSI--RYNPHTFFDDC-----GFPQYRRRRQHNTVKRKGVFVDNQYVVPYNRDLLTQ 279
           C +  I  R  P +FFD+      GFP YRRR     VK+  + +DN+YVVPYNR LL  
Sbjct: 529 CMIDGICSRKFPKSFFDETTIDRDGFPTYRRRDDGRHVKKGDINLDNRYVVPYNRGLLLA 588

Query: 278 FHYHINLEVCNNSRSLKYLFKYCLKGHDTATMILKKKEKNPTESATKDQKKRHDEIKHYL 99
           F  H+N+E CN SR++KYLFKY  KG D ATM+++        S         DE+K +L
Sbjct: 589 FQAHLNVEWCNKSRAIKYLFKYLHKGPDRATMVIEDNVLG-NRSTNATHITMVDEVKTFL 647

Query: 98  DGRYVCVVEAAWRHFGFDIHY 36
           D RYV   EA WR F FDIHY
Sbjct: 648 DCRYVSACEACWRIFNFDIHY 668


>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
            vulgaris subsp. vulgaris]
          Length = 2037

 Score =  120 bits (300), Expect(2) = 1e-25
 Identities = 62/128 (48%), Positives = 75/128 (58%)
 Frame = -2

Query: 419  RYNPHTFFDDCGFPQYRRRRQHNTVKRKGVFVDNQYVVPYNRDLLTQFHYHINLEVCNNS 240
            R+   T  D  G+P YRRR    TV + GV +DN++VVPYN  LL ++  HIN+E CN  
Sbjct: 1267 RFADRTTTDGEGYPIYRRRDDGRTVLKNGVHLDNRFVVPYNAKLLLKYQAHINVEWCNQH 1326

Query: 239  RSLKYLFKYCLKGHDTATMILKKKEKNPTESATKDQKKRHDEIKHYLDGRYVCVVEAAWR 60
            RS+KYLFKY  KGHD     L     + T     D     DEIK Y D RY+   EAAWR
Sbjct: 1327 RSIKYLFKYINKGHDRVIATL----SHDTRGDASDTSDTVDEIKTYYDCRYISPCEAAWR 1382

Query: 59   HFGFDIHY 36
             FGFDIH+
Sbjct: 1383 IFGFDIHF 1390



 Score = 21.2 bits (43), Expect(2) = 1e-25
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 58   ILGLTFIIRFPAVERLPVH 2
            I G     R PAVERL  H
Sbjct: 1383 IFGFDIHFRSPAVERLNFH 1401


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/141 (46%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
 Frame = -2

Query: 437 CYLSSI--RYNPHTFFDDC-----GFPQYRRRRQHNTVKRKGVFVDNQYVVPYNRDLLTQ 279
           C +  I  R  P +FFD+      GFP YRRR     VK+  + +DN+YVVPYNR LL  
Sbjct: 529 CMIDGICSRKFPKSFFDETTIDRDGFPTYRRRDDGRHVKKGDINLDNRYVVPYNRGLLLA 588

Query: 278 FHYHINLEVCNNSRSLKYLFKYCLKGHDTATMILKKKEKNPTESATKDQKKRHDEIKHYL 99
           F  H+N+E CN SR++KYLFKY  KG D A M+++        S         DE+K +L
Sbjct: 589 FQAHLNVEWCNKSRAIKYLFKYLHKGPDRAIMVIEDNVLG-NRSTNATHITMVDEVKTFL 647

Query: 98  DGRYVCVVEAAWRHFGFDIHY 36
           D RYV   EA WR F FDIHY
Sbjct: 648 DCRYVSACEACWRIFNFDIHY 668


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1682

 Score =  115 bits (288), Expect(2) = 8e-25
 Identities = 56/130 (43%), Positives = 79/130 (60%)
 Frame = -2

Query: 419  RYNPHTFFDDCGFPQYRRRRQHNTVKRKGVFVDNQYVVPYNRDLLTQFHYHINLEVCNNS 240
            +++  T  D+ GFP YRRR     +++  V +DN+YVVPYNRDLL ++  HIN+E CN S
Sbjct: 820  KFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDNRYVVPYNRDLLVKYQAHINVERCNRS 879

Query: 239  RSLKYLFKYCLKGHDTATMILKKKEKNPTESATKDQKKRHDEIKHYLDGRYVCVVEAAWR 60
            +S+KYLFKY  KG D AT +++                 HDEIK YL+  Y+   +A WR
Sbjct: 880  KSIKYLFKYMHKGDDQATALIESD---------------HDEIKKYLECTYISGHDACWR 924

Query: 59   HFGFDIHYSF 30
             F F++HY +
Sbjct: 925  IFQFEMHYRY 934



 Score = 23.1 bits (48), Expect(2) = 8e-25
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 34  RFPAVERLPVH 2
           R+P+VERLP H
Sbjct: 933 RYPSVERLPFH 943


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