BLASTX nr result

ID: Angelica23_contig00019438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019438
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]               63   3e-08
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    63   3e-08
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]                     56   3e-06
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...    56   4e-06
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                     55   5e-06

>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/88 (37%), Positives = 49/88 (55%)
 Frame = -1

Query: 264 QRNNTYSTPNPSPYNNRSQNLNQTYEDDLSSHIAGLQMTPPMDRNWYLDSGSTNHMSGDL 85
           Q +  YSTP+PS Y N       T      +++A +   P     W LDSG+T+H++ DL
Sbjct: 390 QMSGAYSTPSPSQYPNA------TVPWQPRANMAAMSYNP-----WLLDSGATHHLTTDL 438

Query: 84  RSFTNHFEYSGGDQVQLGNGDFLPITHT 1
            +   H  Y+GG++V + +G  LPITHT
Sbjct: 439 NNLALHQPYNGGEEVTIADGSTLPITHT 466


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
 Frame = -1

Query: 309 GPSSFANQTPNFNGRQRNNTYSTPNPSP-------YNNRSQN----LNQTYEDDLSSHIA 163
           G  SF N +  ++ R  NN     N  P       Y + + N     +QTY+  +++H+A
Sbjct: 229 GRGSFNNHS--YSSRNFNNVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQPTMNNHLA 286

Query: 162 GLQMTPPM--DRNWYLDSGSTNHMSGDLRSFTNHFEYSGGDQVQLGNGDFLPITH 4
            +  TP    D +WY+D+G+T+H++ +L    +H  ++G D+V +GNG+ L I++
Sbjct: 287 AMVATPSTVGDESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISN 341


>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
 Frame = -1

Query: 333 NQFQQGILGPSSFANQTPNFNGR------QRNNTYSTPNPSPYNNRSQNLNQTYEDDLSS 172
           N +Q    G  S   Q   + GR      Q +N    P    + + +     T       
Sbjct: 254 NSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHNAKRCPQLHQFQSTTNQQQSTSPFTPWQ 313

Query: 171 HIAGLQMTPPMD-RNWYLDSGSTNHMSGDLRSFTNHFEYSGGDQVQLGNGDFLPITHT 1
             A L +  P +  NW LDSG+T+H++ D  + + H  Y+GGD V + +G  +PITHT
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHT 371


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
 Frame = -1

Query: 279 NFNGRQRNNTYSTPNPSPYNNRSQNLNQTYEDDLSSHI-------AGLQMTPPMD-RNWY 124
           N+ G   NN Y+  N    NN+S   +   +  + +         A   +  P +  NW 
Sbjct: 233 NYKGNSNNNQYNNNNR---NNKSHGSSYNSQQSIPASPFTPWQPRANAAIASPYNANNWL 289

Query: 123 LDSGSTNHMSGDLRSFTNHFEYSGGDQVQLGNGDFLPITHT 1
           LDSG+T+H++ DL + + H  Y+GG+ V + +G  L I+HT
Sbjct: 290 LDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHT 330


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -1

Query: 165 AGLQMTPPMD-RNWYLDSGSTNHMSGDLRSFTNHFEYSGGDQVQLGNGDFLPITHT 1
           A L +  P +  NW LDSG+T+H++ D  + + H  Y+GGD V + +G  +PITHT
Sbjct: 316 ANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHT 371


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