BLASTX nr result

ID: Angelica23_contig00019359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019359
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   157   3e-36
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   153   5e-35
ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   142   1e-31
ref|XP_003626798.1| RING finger protein [Medicago truncatula] gi...   141   1e-31
ref|XP_003547527.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   139   6e-31

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  157 bits (397), Expect = 3e-36
 Identities = 103/226 (45%), Positives = 126/226 (55%), Gaps = 26/226 (11%)
 Frame = -2

Query: 601 LYLLLRFISRR---------XXXXXXPIHHRQYPNFTTPKP----NSLPLFTFNSLPAKI 461
           LYLLLR++SRR                   R      +P+     +SLPLFTF S+  + 
Sbjct: 57  LYLLLRYLSRRCSERLHSDDVVLPPVDSDRRFSSRRVSPEDLSLIDSLPLFTFGSVRGRN 116

Query: 460 SG--GDCAVCLSKFEPSDQLRLLPHCCHAFHADCIDTWLVSNLTCPLCRSTVHPSQSDAL 287
           S   GDCAVCLSKFEP DQLRLLP CCHAFHA CIDTWL SN TCPLCRS +  +++D +
Sbjct: 117 SSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADFM 176

Query: 286 DKILPSRNYRSNSFRVEI--XXXXXXXXXXXXXXXSYTIGSFEYVVDEEFEVPIGEARTH 113
             IL S N   +SFR+E+                 SY++GSF+Y+VD E EV +  A TH
Sbjct: 177 KAILASTN-AGDSFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHESEVTV--ASTH 233

Query: 112 RRDVS-------DKDSTGIEVS--VPVAPGDEVAAEVAGERGSWLR 2
           RR  S       DKD  G + +   P  PG   AAEVA  R SWL+
Sbjct: 234 RRGGSESSAAEKDKDDAGAQSNQLAPEPPGPSTAAEVASGR-SWLK 278


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  153 bits (386), Expect = 5e-35
 Identities = 88/170 (51%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
 Frame = -2

Query: 505 NSLPLFTFNSLPAKI--SGGDCAVCLSKFEPSDQLRLLPHCCHAFHADCIDTWLVSNLTC 332
           +SLPLFTF+S+  +   S GDCAVCLSKFEP DQLRLLP CCHAFH  CIDTWL SN TC
Sbjct: 98  DSLPLFTFSSIKRRSTSSSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTC 157

Query: 331 PLCRSTVHPSQSDALDKILPSRNYRSNSFRVEIXXXXXXXXXXXXXXXSYTIGSFEYVVD 152
           PLCRS +H S SD L  + P       SFR+EI               SY++GSFEYVVD
Sbjct: 158 PLCRSPIHASDSDLLKSLSPDA-APPESFRLEI-GSISRRQTASEPRSSYSVGSFEYVVD 215

Query: 151 EEFEVPIGEARTHRRDVSDKDSTGIEVSVPVAPGDEVAAEVAGERGSWLR 2
           E+ EV +  ++THRR VSDK     E          +A++V+G   SWL+
Sbjct: 216 EDSEVTM--SQTHRRSVSDK-----EGGTHSRQDSNLASQVSGGGRSWLK 258


>ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max]
          Length = 359

 Score =  142 bits (357), Expect = 1e-31
 Identities = 88/181 (48%), Positives = 108/181 (59%), Gaps = 13/181 (7%)
 Frame = -2

Query: 505 NSLPLFTFNSLPAKISG--GDCAVCLSKFEPSDQLRLLPHCCHAFHADCIDTWLVSNLTC 332
           ++LPLFTF+S+  + +   GDCAVCLSKF   D LRLLP CCHAFHA+CIDTWL SNL+C
Sbjct: 118 DTLPLFTFSSVTRRSAAVSGDCAVCLSKFHHHDLLRLLPLCCHAFHAECIDTWLQSNLSC 177

Query: 331 PLCRSTVHPSQSDALDKIL--PSRNYRSNSFRVEI--------XXXXXXXXXXXXXXXSY 182
           PLCRST+    SD L KIL  PS    S+SFR+E+                       SY
Sbjct: 178 PLCRSTIVADDSD-LAKILRPPSSAGSSDSFRLELGNISRRGTDGAAEGGSVARGGSRSY 236

Query: 181 TIGSFEYVVDEEFEVPIGEARTHRRDVSDKDSTGIEVSVPVAPGD-EVAAEVAGERGSWL 5
           +IGSFEY++D+E EVP   AR  RR V D          PV+  +  +A EV G R SWL
Sbjct: 237 SIGSFEYLIDDESEVPFSHAR--RRSVDDAKEFPAPAEAPVSHNEASLAGEVGGVR-SWL 293

Query: 4   R 2
           +
Sbjct: 294 K 294


>ref|XP_003626798.1| RING finger protein [Medicago truncatula]
           gi|355520820|gb|AET01274.1| RING finger protein
           [Medicago truncatula]
          Length = 316

 Score =  141 bits (356), Expect = 1e-31
 Identities = 94/196 (47%), Positives = 115/196 (58%), Gaps = 15/196 (7%)
 Frame = -2

Query: 544 HHRQYPNFTTPKP--NSLPLFTFNSLPAK---ISGGDCAVCLSKFEPSDQLRLLPHCCHA 380
           H R+    TTP    +SLPLFTF+S+  +   ++  DCAVCLSKF  SD LR LP CCHA
Sbjct: 68  HSRRISPETTPPSVIDSLPLFTFSSISRRSSAVTAADCAVCLSKFRNSDLLRSLPLCCHA 127

Query: 379 FHADCIDTWLVSNLTCPLCRSTVHPSQSDALDKILPSRNYRSNSFRVEI--------XXX 224
           FHA+CIDTWL SNL+CPLCR+++ PS SD L KIL  R+  S+SFRV+I           
Sbjct: 128 FHAECIDTWLRSNLSCPLCRASILPSDSD-LAKIL--RSTSSDSFRVDIGNISRRGNNLP 184

Query: 223 XXXXXXXXXXXXSYTIGSFEYVVDEEFEVPIGEARTHRRDVSDKDSTGIEVSVPVAPGDE 44
                       SY+IGSFEY V E  EV     + HRR VSD+    I VS   +   E
Sbjct: 185 NPDAVTTGGDSRSYSIGSFEYYVVEPSEVSF--TQDHRRSVSDQKDIHIPVSEDSSMTHE 242

Query: 43  --VAAEVAGERGSWLR 2
             +A EVAG  G WL+
Sbjct: 243 NTIAGEVAGS-GHWLK 257


>ref|XP_003547527.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max]
          Length = 335

 Score =  139 bits (351), Expect = 6e-31
 Identities = 87/182 (47%), Positives = 105/182 (57%), Gaps = 16/182 (8%)
 Frame = -2

Query: 499 LPLFTFNSLPAKIS---GGDCAVCLSKFEPSDQLRLLPHCCHAFHADCIDTWLVSNLTCP 329
           LP FTF+S+  +     GGDCAVCLSKFE +D LRLLP CCHAFHA+CIDTWL S LTCP
Sbjct: 102 LPTFTFSSITRRADAAGGGDCAVCLSKFEQNDLLRLLPLCCHAFHAECIDTWLRSKLTCP 161

Query: 328 LCRSTVHPSQSDALDKILPSRNYRSNSFRVEI------XXXXXXXXXXXXXXXSYTIGSF 167
           LCRSTV  S+SD       S    S+SFR+EI                     SY++G+F
Sbjct: 162 LCRSTVAASESDLAMVFRSSSVAGSDSFRLEIGNISSRREGDITAVAGETRGRSYSVGAF 221

Query: 166 EYVVDEEFEVPIGEA--RTHRRDVSDKDSTGIEVSVPVAPGDEVAAEVAGERGS-----W 8
           EY++DEE EV +  A     RR VS + + G  V   VAP D +A EV    GS     W
Sbjct: 222 EYLIDEEAEVEVEVAFGLADRRIVSGEKNDGAPV---VAPADSLAGEVGRGGGSRNGNGW 278

Query: 7   LR 2
           L+
Sbjct: 279 LK 280


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