BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019300
         (1346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   206   e-101
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              206   e-101
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...   168   2e-81
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,...   168   2e-81
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...   172   7e-77

>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  206 bits (523), Expect(2) = e-101
 Identities = 95/142 (66%), Positives = 124/142 (87%)
 Frame = -1

Query: 1079 LSSKEEAEYILLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRES 900
            L+ +EEAE+ L +KEEA LEA RR+I ET +H+PT NQ A+ VG+ +SSLDK+LC GRES
Sbjct: 130  LTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRES 189

Query: 899  RERITESYKRLVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWI 720
            RERI +SY+RLV+SIA+ YQG+GL++QDL+QEGSIGLLRG ++F+P+RGYKLSTYVYWWI
Sbjct: 190  RERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWI 249

Query: 719  RQAILKSVASKSRTIRLPLIMC 654
            RQAI++++A+KSR IRLP  +C
Sbjct: 250  RQAIVRAIANKSRIIRLPGSIC 271



 Score =  192 bits (487), Expect(2) = e-101
 Identities = 92/158 (58%), Positives = 127/158 (80%)
 Frame = -3

Query: 651 GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 472
           GS+CEM+ KIAEA   L+ +LRR P+ +EIAE +   V TVRL+  RS+ P+S+D+A+TS
Sbjct: 268 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 327

Query: 471 QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 292
           QGCM LQ+I+PGP+E TP+ M+ +QL KQE+E+ LN L +RE+ I+RL+FG+NGETP SF
Sbjct: 328 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 387

Query: 291 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 178
           EEI R++KLSRER+RQ+N  ALSKL+Q S+VD + +Y+
Sbjct: 388 EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYM 425


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  206 bits (523), Expect(2) = e-101
 Identities = 95/142 (66%), Positives = 124/142 (87%)
 Frame = -1

Query: 1079 LSSKEEAEYILLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRES 900
            L+ +EEAE+ L +KEEA LEA RR+I ET +H+PT NQ A+ VG+ +SSLDK+LC GRES
Sbjct: 23   LTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRES 82

Query: 899  RERITESYKRLVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWI 720
            RERI +SY+RLV+SIA+ YQG+GL++QDL+QEGSIGLLRG ++F+P+RGYKLSTYVYWWI
Sbjct: 83   RERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWI 142

Query: 719  RQAILKSVASKSRTIRLPLIMC 654
            RQAI++++A+KSR IRLP  +C
Sbjct: 143  RQAIVRAIANKSRIIRLPGSIC 164



 Score =  192 bits (487), Expect(2) = e-101
 Identities = 92/158 (58%), Positives = 127/158 (80%)
 Frame = -3

Query: 651 GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 472
           GS+CEM+ KIAEA   L+ +LRR P+ +EIAE +   V TVRL+  RS+ P+S+D+A+TS
Sbjct: 161 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 220

Query: 471 QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 292
           QGCM LQ+I+PGP+E TP+ M+ +QL KQE+E+ LN L +RE+ I+RL+FG+NGETP SF
Sbjct: 221 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 280

Query: 291 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 178
           EEI R++KLSRER+RQ+N  ALSKL+Q S+VD + +Y+
Sbjct: 281 EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYM 318


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
            [Cucumis sativus]
          Length = 436

 Score =  168 bits (425), Expect(2) = 2e-81
 Identities = 90/188 (47%), Positives = 120/188 (63%)
 Frame = -1

Query: 1229 WKEVERDWKEGVGVXXXXXXXXRSCEVEKEGCAEIRHIFSRSKTKRAGHHLSSKEEAEYI 1050
            WK+  R  ++ VGV                  AE   I   S   R G+ LS KEEAE  
Sbjct: 108  WKKKRRKRRKEVGVK-----------------AEENWIALSSGPLRPGY-LSPKEEAELC 149

Query: 1049 LLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRESRERITESYKR 870
            L +KE   LE V+ +I+ET +H+PT  QLA  +G     +D+ILC  RESR+R+   Y +
Sbjct: 150  LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 209

Query: 869  LVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWIRQAILKSVAS 690
            LVISIA+ YQG+GL++QDL QEG+IGLL+G ++F P RG+KLSTY YWWIRQAI++++  
Sbjct: 210  LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 269

Query: 689  KSRTIRLP 666
            KSR +RLP
Sbjct: 270  KSRLVRLP 277



 Score =  162 bits (410), Expect(2) = 2e-81
 Identities = 78/158 (49%), Positives = 116/158 (73%)
 Frame = -3

Query: 651 GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 472
           G + +M+ +IAE NN+L +KL R P+ +E+AES+   + T+RL+  RSK P+S+++ +  
Sbjct: 278 GHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVND 337

Query: 471 QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 292
           + C+ LQ+IMPGP+ LTPE M++++L KQEL++ LN LS RE+ I+ L+FGLNGE P+SF
Sbjct: 338 RSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSF 397

Query: 291 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 178
           EEI + L LSRE IRQ N   LSKLK+  ++D +  Y+
Sbjct: 398 EEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYL 435


>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
            [Cucumis sativus]
          Length = 341

 Score =  168 bits (425), Expect(2) = 2e-81
 Identities = 90/188 (47%), Positives = 120/188 (63%)
 Frame = -1

Query: 1229 WKEVERDWKEGVGVXXXXXXXXRSCEVEKEGCAEIRHIFSRSKTKRAGHHLSSKEEAEYI 1050
            WK+  R  ++ VGV                  AE   I   S   R G+ LS KEEAE  
Sbjct: 13   WKKKRRKRRKEVGVK-----------------AEENWIALSSGPLRPGY-LSPKEEAELC 54

Query: 1049 LLIKEEAKLEAVRRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRESRERITESYKR 870
            L +KE   LE V+ +I+ET +H+PT  QLA  +G     +D+ILC  RESR+R+   Y +
Sbjct: 55   LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 114

Query: 869  LVISIASNYQGRGLNMQDLVQEGSIGLLRGVQKFNPERGYKLSTYVYWWIRQAILKSVAS 690
            LVISIA+ YQG+GL++QDL QEG+IGLL+G ++F P RG+KLSTY YWWIRQAI++++  
Sbjct: 115  LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 174

Query: 689  KSRTIRLP 666
            KSR +RLP
Sbjct: 175  KSRLVRLP 182



 Score =  162 bits (410), Expect(2) = 2e-81
 Identities = 78/158 (49%), Positives = 116/158 (73%)
 Frame = -3

Query: 651 GSVCEMIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTS 472
           G + +M+ +IAE NN+L +KL R P+ +E+AES+   + T+RL+  RSK P+S+++ +  
Sbjct: 183 GHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVND 242

Query: 471 QGCMNLQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSF 292
           + C+ LQ+IMPGP+ LTPE M++++L KQEL++ LN LS RE+ I+ L+FGLNGE P+SF
Sbjct: 243 RSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSF 302

Query: 291 EEIARVLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 178
           EEI + L LSRE IRQ N   LSKLK+  ++D +  Y+
Sbjct: 303 EEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYL 340


>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 403

 Score =  172 bits (436), Expect(2) = 7e-77
 Identities = 87/153 (56%), Positives = 116/153 (75%)
 Frame = -3

Query: 636 MIPKIAEANNNLAVKLRRSPSLEEIAESVGTTVRTVRLIYRRSKEPVSLDRALTSQGCMN 457
           M+ KIAEANN L  +LRR P+  EIAE +   V TV+L+  RS++P+SLDR++T Q  + 
Sbjct: 250 MVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLI 309

Query: 456 LQDIMPGPEELTPETMLIKQLRKQELEKTLNQLSDRESTIVRLHFGLNGETPRSFEEIAR 277
           L++I+PGP E+ PE M+ +QL KQ + K LN L  RE  IVRL+FGLNGETP SFEEI +
Sbjct: 310 LKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGK 369

Query: 276 VLKLSRERIRQVNGNALSKLKQNSMVDDMIVYI 178
           +LKLSRERIRQ++G ALSKL+QN++VD +  Y+
Sbjct: 370 LLKLSRERIRQIHGIALSKLEQNTLVDSLKFYV 402



 Score =  143 bits (360), Expect(2) = 7e-77
 Identities = 78/167 (46%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
 Frame = -1

Query: 1157 CEVEKEGCAEIRHIFSRSKT---KRAGHHLSSKEEAEYILLIKEEAKLEAVRRKILETTK 987
            C VE+E    I++ F R K          LSS +EAE  L +KE AK+E  ++++ E   
Sbjct: 86   CMVEEEN---IQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLKEGAKIEVAKQRMTEQEG 142

Query: 986  HDPTLNQLADVVGVPKSSLDKILCGGRESRERITESYKRLVISIASNYQGRGLNMQDLVQ 807
                 N       +  +S+DK+L   R+S+ER+   Y+ LV SIA++YQG+GL++QDL+Q
Sbjct: 143  -----NSAISRFTLENTSVDKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQ 197

Query: 806  EGSIGLLRGVQKFNPERGYKLSTYVYWWIRQAILKSVASKSRTIRLP 666
            EG+IGLL G +KF+P RG KLSTYVYWWI+Q I+K++A KSR IRLP
Sbjct: 198  EGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLP 244