BLASTX nr result

ID: Angelica23_contig00019175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019175
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...   132   1e-28
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   132   1e-28
ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...   125   2e-26
ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like...   121   3e-25
ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago trunca...   121   3e-25

>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score =  132 bits (333), Expect = 1e-28
 Identities = 90/176 (51%), Positives = 102/176 (57%)
 Frame = +1

Query: 220 NPNFPKSIFKSPIFKNSPLTSRTVFSPRGYSTESKFTPSENVSSIVDEITGLTLLEVSXX 399
           NP F  S+  +P   NS L +R  F  +   T S   PSE VSSIVDEI+GLTLLEVS  
Sbjct: 22  NPTFCDSL--NP---NSHLWNRLNFVLK--YTSSAQVPSERVSSIVDEISGLTLLEVSDL 74

Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTQEKVAEKTAFDLKLESGFDASV 579
                                                 + K AEKTAFDLKLE+ FDA+ 
Sbjct: 75  TELLRKKLDINEMPVMAVMMPGMGFGVRGAGGAAPKAAEVKAAEKTAFDLKLEA-FDAAA 133

Query: 580 KIKVIKEVRAFTNLGLKEAKELVEKAPTLLKKGVTKEEGEKIIAKLKEVGAKVLME 747
           KIK+IKEVR FT+LGLKEAK+LVE APTLLKKGV KEE E II K+K VGAKV ME
Sbjct: 134 KIKIIKEVRTFTDLGLKEAKDLVEHAPTLLKKGVPKEEAENIIEKMKAVGAKVTME 189


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  132 bits (332), Expect = 1e-28
 Identities = 84/155 (54%), Positives = 97/155 (62%), Gaps = 6/155 (3%)
 Frame = +1

Query: 301 RGYST---ESKFTPSENVSSIVDEITGLTLLEVSXXXXXXXXXXXXXXXXXXXXXXXXXX 471
           R Y+T   ES+  PSE VS+IVDEI+GLTLLEV+                          
Sbjct: 49  RNYTTASPESRPAPSERVSAIVDEISGLTLLEVADLTEVLREKLDVKEMPVMTMMMPGMG 108

Query: 472 XXXXXXXXXXXXVT---QEKVAEKTAFDLKLESGFDASVKIKVIKEVRAFTNLGLKEAKE 642
                            +EK  EKTAFD+KL++ FDA+ KIK+IKEVR FTNLGLKEAK+
Sbjct: 109 FGGFRGAGKGGPGAKGVEEKKEEKTAFDVKLDA-FDAASKIKIIKEVRTFTNLGLKEAKD 167

Query: 643 LVEKAPTLLKKGVTKEEGEKIIAKLKEVGAKVLME 747
           LVEKAPTLLKKGVTKEE E IIAK+KEVGAKV ME
Sbjct: 168 LVEKAPTLLKKGVTKEEAETIIAKMKEVGAKVSME 202


>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score =  125 bits (313), Expect = 2e-26
 Identities = 83/179 (46%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
 Frame = +1

Query: 235 KSIFKSPIFKNS---PLTSRTVFSPRGYSTE-SKFTPSENVSSIVDEITGLTLLEVSXXX 402
           K++F++P F      P +   ++     + E +   PS+ V+++VDEI+ LTLLE+S   
Sbjct: 16  KTLFRNPTFNPQSTIPRSPNLIYQFTSIAQEPNPPAPSDKVAALVDEISELTLLEISDLT 75

Query: 403 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----TQEKVAEKTAFDLKLESGFD 570
                                                    +EKV EKT FD+KLE GFD
Sbjct: 76  EVLRNKLDIKEMPVMAVMMPGMGFSGMKGGVKGGAAGAAKAEEKV-EKTVFDVKLE-GFD 133

Query: 571 ASVKIKVIKEVRAFTNLGLKEAKELVEKAPTLLKKGVTKEEGEKIIAKLKEVGAKVLME 747
           A+ KIKVIKEVR FT+LGLKEAK+LVEKAPTLLKKGVTKEE EKI AK+KEVGAKV ME
Sbjct: 134 AAAKIKVIKEVRGFTDLGLKEAKDLVEKAPTLLKKGVTKEEAEKITAKMKEVGAKVSME 192


>ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 194

 Score =  121 bits (304), Expect = 3e-25
 Identities = 76/149 (51%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
 Frame = +1

Query: 310 STESKFTPSENVSSIVDEITGLTLLEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 489
           S+ S+   SE V++IVDE+ GLTLLEV                                 
Sbjct: 47  SSASQSQGSEKVAAIVDELMGLTLLEVMDLVEVMREKRGVNELPIAMLMVPGMGVPRGVP 106

Query: 490 XXXXXX---VTQEKVAEKTAFDLKLESGFDASVKIKVIKEVRAFTNLGLKEAKELVEKAP 660
                    V + K  EKT FD+KLE GFDA+ KIKVIKEVR FT+LGLKEAK+LVEK P
Sbjct: 107 NGGGGGAAGVAEVKAVEKTVFDVKLE-GFDAATKIKVIKEVRTFTSLGLKEAKDLVEKVP 165

Query: 661 TLLKKGVTKEEGEKIIAKLKEVGAKVLME 747
            +LKKGVTKEE E IIAK+KEVGAKV ME
Sbjct: 166 AMLKKGVTKEEAESIIAKMKEVGAKVSME 194


>ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago truncatula]
           gi|355523407|gb|AET03861.1| 50S ribosomal protein L12-2
           [Medicago truncatula] gi|388508470|gb|AFK42301.1|
           unknown [Medicago truncatula]
          Length = 195

 Score =  121 bits (303), Expect = 3e-25
 Identities = 82/185 (44%), Positives = 103/185 (55%), Gaps = 14/185 (7%)
 Frame = +1

Query: 235 KSIFKSPIFKNSPLTSRTVFSP------RGYSTESKFTPSENVSSIVDEITGLTLLEV-- 390
           K++ ++P F +  +    +  P      R Y+T+S     ENVS+IV+E+ GLTL+E   
Sbjct: 14  KTLIQNPNFLSPQIPKPYIIPPNPKSHLRNYNTDSP--NHENVSAIVEELAGLTLIEAMD 71

Query: 391 ------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTQEKVAEKTAFDLK 552
                                                           +KV EKTAFD+K
Sbjct: 72  LVEVMREKKGINELPIMMLMVPGMGIRGMPRGVGGGKGGGGSEKGGEVKKVEEKTAFDVK 131

Query: 553 LESGFDASVKIKVIKEVRAFTNLGLKEAKELVEKAPTLLKKGVTKEEGEKIIAKLKEVGA 732
           L+ GFDA+ KIKVIKEVR+FT+LGLKEAK+LVEK+PTLLKKGVTKEE E IIAKLKEVGA
Sbjct: 132 LD-GFDAASKIKVIKEVRSFTSLGLKEAKDLVEKSPTLLKKGVTKEEAEGIIAKLKEVGA 190

Query: 733 KVLME 747
           K  ME
Sbjct: 191 KASME 195


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