BLASTX nr result

ID: Angelica23_contig00019163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019163
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531582.1| serine/arginine rich splicing factor, putati...   114   9e-24
ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775...   113   2e-23
ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group] g...   113   2e-23
gb|ACU22994.1| unknown [Glycine max]                                  113   2e-23
gb|ABF96206.1| RNA recognition motif family protein, expressed [...   113   2e-23

>ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528778|gb|EEF30785.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 216

 Score =  114 bits (285), Expect = 9e-24
 Identities = 55/67 (82%), Positives = 59/67 (88%), Gaps = 4/67 (5%)
 Frame = +3

Query: 3   PRDYYSGEPRGFGFVQYVYPEDAVDAKYHMDGQVLLGRELTVVFAEENRKKPQEMRA--- 173
           PRDYY+GEPRGFGFVQYV P DA DAK+HMDG++LLGRELTVVFAEENRKKP EMRA   
Sbjct: 72  PRDYYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARER 131

Query: 174 -RGRSYD 191
            RGRSYD
Sbjct: 132 VRGRSYD 138


>ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
           max] gi|356553017|ref|XP_003544855.1| PREDICTED:
           uncharacterized protein LOC100775883 isoform 2 [Glycine
           max]
          Length = 249

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/66 (83%), Positives = 57/66 (86%), Gaps = 3/66 (4%)
 Frame = +3

Query: 3   PRDYYSGEPRGFGFVQYVYPEDAVDAKYHMDGQVLLGRELTVVFAEENRKKPQEMRA--- 173
           P+DYY+GEPRGFGFVQYV P DA DAKYHMDGQVLLGRELTVVFAEENRKKP EMR    
Sbjct: 73  PKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRER 132

Query: 174 RGRSYD 191
           RGR YD
Sbjct: 133 RGRFYD 138


>ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
           gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa
           Japonica Group]
          Length = 251

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/69 (78%), Positives = 58/69 (84%), Gaps = 6/69 (8%)
 Frame = +3

Query: 3   PRDYYSGEPRGFGFVQYVYPEDAVDAKYHMDGQVLLGRELTVVFAEENRKKPQEMRA--- 173
           PRDYY+GEPRGFGF+QY  PEDA DAKYHMDGQ+LLGRE+TVVFAEENRKKP EMRA   
Sbjct: 76  PRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARER 135

Query: 174 ---RGRSYD 191
              R RSYD
Sbjct: 136 VGSRDRSYD 144


>gb|ACU22994.1| unknown [Glycine max]
          Length = 214

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/66 (83%), Positives = 57/66 (86%), Gaps = 3/66 (4%)
 Frame = +3

Query: 3   PRDYYSGEPRGFGFVQYVYPEDAVDAKYHMDGQVLLGRELTVVFAEENRKKPQEMRA--- 173
           P+DYY+GEPRGFGFVQYV P DA DAKYHMDGQVLLGRELTVVFAEENRKKP EMR    
Sbjct: 73  PKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRER 132

Query: 174 RGRSYD 191
           RGR YD
Sbjct: 133 RGRFYD 138


>gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 218

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/69 (78%), Positives = 58/69 (84%), Gaps = 6/69 (8%)
 Frame = +3

Query: 3   PRDYYSGEPRGFGFVQYVYPEDAVDAKYHMDGQVLLGRELTVVFAEENRKKPQEMRA--- 173
           PRDYY+GEPRGFGF+QY  PEDA DAKYHMDGQ+LLGRE+TVVFAEENRKKP EMRA   
Sbjct: 69  PRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARER 128

Query: 174 ---RGRSYD 191
              R RSYD
Sbjct: 129 VGSRDRSYD 137


Top