BLASTX nr result

ID: Angelica23_contig00019131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00019131
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box pr...   181   7e-44
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   180   1e-43
ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box pr...   166   1e-39
ref|XP_002523077.1| Phytochrome A-associated F-box protein, puta...   164   7e-39
ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38

>ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box protein-like [Vitis
           vinifera]
          Length = 330

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/133 (65%), Positives = 103/133 (77%)
 Frame = -2

Query: 406 LFSKLSDDVILKIFINLEDDPTHWAILDCVCTKFSSLMRTVCWKTKCSERIPLVVSDLLA 227
           +FSKLSDDV+L I   LEDDP +WA L CVCTKFSSL+R VCWKTKCS+ IP +V+DL +
Sbjct: 8   VFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSIVADLFS 67

Query: 226 GSRAGDAPPGGWAALHKLAVCCPGLHHCGVLLENSDFGLERELGPDENYRSSNMYRVGQA 47
           G     +PPGGWAALHKL+VCCPGL H GVLLENSDFGLERELGPDE+YR +  +   Q 
Sbjct: 68  GP-GDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKAGSF---QI 123

Query: 46  QVSNACSTAVVAS 8
            V +A + AV +S
Sbjct: 124 TVGDATTPAVASS 136


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/143 (62%), Positives = 108/143 (75%)
 Frame = -2

Query: 436 SLIQIASETMLFSKLSDDVILKIFINLEDDPTHWAILDCVCTKFSSLMRTVCWKTKCSER 257
           S + + +ET+ FSKLSDDV+L I   LEDDP +WA L CVCTKFSSL+R VCWKTKCS+ 
Sbjct: 389 SAMTMGNETV-FSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQT 447

Query: 256 IPLVVSDLLAGSRAGDAPPGGWAALHKLAVCCPGLHHCGVLLENSDFGLERELGPDENYR 77
            P +V+DL +G     +PPGGWAALHKL+VCCPGL H GVLLENSDFGLERELGPDE+YR
Sbjct: 448 XPSIVADLFSGP-GDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYR 506

Query: 76  SSNMYRVGQAQVSNACSTAVVAS 8
            +  +   Q  V +A + AV +S
Sbjct: 507 KAGSF---QITVGDATTPAVASS 526


>ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box protein-like [Cucumis
           sativus]
          Length = 379

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/130 (63%), Positives = 93/130 (71%)
 Frame = -2

Query: 406 LFSKLSDDVILKIFINLEDDPTHWAILDCVCTKFSSLMRTVCWKTKCSERIPLVVSDLLA 227
           LFS L DD++L IF  LEDDP +WA L CV TKFS  +R +CWKTKCS  IP +VSDLL 
Sbjct: 50  LFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLV 109

Query: 226 GSRAGDAPPGGWAALHKLAVCCPGLHHCGVLLENSDFGLERELGPDENYRSSNMYRVGQA 47
           G      P GGWA+LHKLAVCCPGL H GVLLENSDFGLERELGPDENY      +  Q 
Sbjct: 110 GD---SIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQP 166

Query: 46  QVSNACSTAV 17
           + SN  STA+
Sbjct: 167 E-SNPSSTAL 175


>ref|XP_002523077.1| Phytochrome A-associated F-box protein, putative [Ricinus communis]
           gi|223537639|gb|EEF39262.1| Phytochrome A-associated
           F-box protein, putative [Ricinus communis]
          Length = 332

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/124 (61%), Positives = 96/124 (77%)
 Frame = -2

Query: 415 ETMLFSKLSDDVILKIFINLEDDPTHWAILDCVCTKFSSLMRTVCWKTKCSERIPLVVSD 236
           ++ +FSKL+DD++L IF  LEDDP +WA L CVCTKF+SL+R +C+K KC   IP VVSD
Sbjct: 3   DSSIFSKLADDIVLTIFFKLEDDPRNWARLACVCTKFTSLIRNICFKAKCHRTIPSVVSD 62

Query: 235 LLAGSRAGDAPPGGWAALHKLAVCCPGLHHCGVLLENSDFGLERELGPDENYRSSNMYRV 56
           LLA S    A PGGW++LHKL+VCCPGL H G LLE+SDFGLERELGPD+NY  +++ R 
Sbjct: 63  LLASS--DGAIPGGWSSLHKLSVCCPGLLHAGFLLEHSDFGLERELGPDDNYHKTSVSRT 120

Query: 55  GQAQ 44
             +Q
Sbjct: 121 TSSQ 124


>ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|222844435|gb|EEE81982.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/117 (67%), Positives = 94/117 (80%), Gaps = 1/117 (0%)
 Frame = -2

Query: 418 SETMLFSKLSDDVILKIFINLEDDPTHWAILDCVCTKFSSLMRTVCWKTKCSERIPLVVS 239
           +ET  FSKLSDDV+L IF  LEDDP +WA L CVCTKFSSL+R +CWK+KC++ IP VVS
Sbjct: 2   TETTGFSKLSDDVVLNIFSKLEDDPRNWARLACVCTKFSSLIRDICWKSKCNKTIPSVVS 61

Query: 238 DLLAGSRAGDAP-PGGWAALHKLAVCCPGLHHCGVLLENSDFGLERELGPDENYRSS 71
           DLL+   + D+P PG W+ALHKLAVCCPGL H GV LE+SDFGLERELGPD+ +  S
Sbjct: 62  DLLS---SPDSPFPGAWSALHKLAVCCPGLLHAGVFLEHSDFGLERELGPDDYFHKS 115


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