BLASTX nr result
ID: Angelica23_contig00018423
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00018423
(1389 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi... 520 e-145
ref|XP_002521239.1| pentatricopeptide repeat-containing protein,... 478 e-132
dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana] 464 e-128
ref|NP_565402.1| pentatricopeptide repeat-containing protein [Ar... 464 e-128
ref|NP_849962.1| pentatricopeptide repeat-containing protein [Ar... 464 e-128
>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
[Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
protein product [Vitis vinifera]
Length = 435
Score = 520 bits (1338), Expect = e-145
Identities = 262/423 (61%), Positives = 332/423 (78%)
Frame = +3
Query: 93 LLPSCALSKQGQRFFTSLATSVTGDPLVTDRLIRKFIASSSKSVALNALSHLLTPNSSHS 272
LL CALSKQGQ F +S+A DP ++RLI KFIASSSKS+ALNALSHLL+P ++H
Sbjct: 19 LLIQCALSKQGQLFLSSVAR----DPSASNRLICKFIASSSKSIALNALSHLLSPTTTHP 74
Query: 273 HLSSLAFPFYSLLTRAPWFSWNSKLVADVIALLYKQERFREADALISETVSKLDIREREL 452
+LSSLA P YS ++ A WFSWN KL+ADVIALLYKQ + +EA+ L+SET+ KL RER+L
Sbjct: 75 YLSSLALPLYSRISEASWFSWNPKLIADVIALLYKQGQLKEAETLVSETLIKLGSRERDL 134
Query: 453 CTFYCCLIEFHSKHKSKQGVFDSYTSLKQILSCSSSVYLKRRAYESMICSLCVIDLPREA 632
+FYC LI+ HSKH S QGVFD + L +I+S SSSVY+K RAY+SMI SLC + LP EA
Sbjct: 135 VSFYCNLIDSHSKHSSNQGVFDVISRLSRIVSESSSVYVKERAYKSMISSLCAVGLPLEA 194
Query: 633 ENMMEEMKVQGITSKPSLFELRSIVYAYGRVGLFKDMKRLLFEMESEGIKMDTVCFNMVL 812
EN++EEM+V+G+ KPS+FE RS+VY YGRVGL +DM+R+L +M +EG ++DTV NMVL
Sbjct: 195 ENLIEEMRVKGL--KPSVFEFRSVVYGYGRVGLSEDMQRILLQMGNEGFELDTVVSNMVL 252
Query: 813 SSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPKSIPLSLNELLA 992
SS GA+ + EMVSWLQRMK ++P SIRTYN+VLNSCP IMS+LQD K+ P +++EL+
Sbjct: 253 SSYGAYNKQSEMVSWLQRMKNSSIPFSIRTYNSVLNSCPMIMSILQDLKTFPPTIDELME 312
Query: 993 DLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQWFDELRTRFEHV 1172
L +E++LV+ELI S VL E M W E KLDLHGMHL SAYLI+LQW +ELR R
Sbjct: 313 TLKGDEALLVKELIGSMVLAELMEWDCSEGKLDLHGMHLGSAYLIMLQWREELRYRLNAA 372
Query: 1173 ETDIPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKS 1352
E +P E+ ++CGSGKHS+VRG+SPVK +V+E+M RT SP++IDRKNIGCF+AK KV K+
Sbjct: 373 EYVMPVEITVVCGSGKHSSVRGESPVKRMVREMMTRTRSPMKIDRKNIGCFVAKAKVVKN 432
Query: 1353 WLC 1361
WLC
Sbjct: 433 WLC 435
>ref|XP_002521239.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539507|gb|EEF41095.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 460
Score = 478 bits (1231), Expect = e-132
Identities = 236/428 (55%), Positives = 319/428 (74%), Gaps = 2/428 (0%)
Frame = +3
Query: 84 PLRLLPSCA-LSKQGQRFFTSLATSVT-GDPLVTDRLIRKFIASSSKSVALNALSHLLTP 257
P++ + CA LSKQGQRF +SLA + T GD + T+RLI+KF+A+S KS+AL+ALSHLL P
Sbjct: 35 PMKWVFRCAALSKQGQRFLSSLAIATTKGDTVATNRLIKKFVAASPKSIALDALSHLLNP 94
Query: 258 NSSHSHLSSLAFPFYSLLTRAPWFSWNSKLVADVIALLYKQERFREADALISETVSKLDI 437
+SSHSHLSSLAF Y + A WF WN KLVADV+A L KQ R+ E+ L+S+++SKL +
Sbjct: 95 HSSHSHLSSLAFTLYLKIAEARWFQWNPKLVADVVAFLDKQGRYDESATLVSDSISKLQV 154
Query: 438 RERELCTFYCCLIEFHSKHKSKQGVFDSYTSLKQILSCSSSVYLKRRAYESMICSLCVID 617
+ER+L FYC L+E SK S +G +S SL Q++ S+SVY+KR+ Y+SM+ LC +
Sbjct: 155 KERDLARFYCNLVESQSKQNSIRGFDNSVASLMQLVCNSNSVYVKRQGYKSMVNGLCEMG 214
Query: 618 LPREAENMMEEMKVQGITSKPSLFELRSIVYAYGRVGLFKDMKRLLFEMESEGIKMDTVC 797
PREAE ++EEM +G+ +PS+FE + +VYAYG +G F++M + L +ME G ++DTVC
Sbjct: 215 RPREAETLIEEMGKEGV--RPSMFEFKCVVYAYGSLGSFEEMNKCLHQMERAGFRVDTVC 272
Query: 798 FNMVLSSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPKSIPLSL 977
NM+L+S GAH L EMV WLQ+MK L +P S+RT N+ LNSCP+IMSM+Q+ P+S+
Sbjct: 273 SNMILASYGAHNALPEMVLWLQKMKDLGIPFSLRTCNSALNSCPTIMSMMQNSNDFPISI 332
Query: 978 NELLADLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQWFDELRT 1157
++L+ L ++E++LV+E++ SSVL EAM W E KLDLHG HL SAYLIIL W +E+R
Sbjct: 333 HDLMKILSEDEALLVKEIVTSSVLDEAMKWDVAEAKLDLHGTHLCSAYLIILLWIEEMRK 392
Query: 1158 RFEHVETDIPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKG 1337
RF+ V P E+ ++CGSG HS VRG+SPVK +VK+ MVR SP+RIDR+NIGCFIAKG
Sbjct: 393 RFKSVNYVNPTEITVVCGSGNHSIVRGESPVKCMVKDFMVRARSPMRIDRRNIGCFIAKG 452
Query: 1338 KVCKSWLC 1361
KV + WLC
Sbjct: 453 KVVEEWLC 460
>dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 464 bits (1194), Expect = e-128
Identities = 237/418 (56%), Positives = 310/418 (74%), Gaps = 1/418 (0%)
Frame = +3
Query: 111 LSKQGQRFFTSLAT-SVTGDPLVTDRLIRKFIASSSKSVALNALSHLLTPNSSHSHLSSL 287
L K G RF +SL++ ++ GDP +R I+KF+A+S KSVALN LSHLL+ +SH HLS
Sbjct: 85 LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 144
Query: 288 AFPFYSLLTRAPWFSWNSKLVADVIALLYKQERFREADALISETVSKLDIRERELCTFYC 467
A YS +T A WF WN KL+A++IALL KQERF E++ L+S VS+L ER+ F C
Sbjct: 145 ALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLC 204
Query: 468 CLIEFHSKHKSKQGVFDSYTSLKQILSCSSSVYLKRRAYESMICSLCVIDLPREAENMME 647
L+E +SK S QG ++ L++I+ SSSVY+K +AY+SM+ LC +D P +AE ++E
Sbjct: 205 NLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIE 264
Query: 648 EMKVQGITSKPSLFELRSIVYAYGRVGLFKDMKRLLFEMESEGIKMDTVCFNMVLSSLGA 827
EM+++ I KP LFE +S++Y YGR+GLF DM R++ M +EG K+DTVC NMVLSS GA
Sbjct: 265 EMRMEKI--KPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGA 322
Query: 828 HAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPKSIPLSLNELLADLCDN 1007
H L +M SWLQ++K NVP SIRTYN+VLNSCP+I+SML+D S P+SL+EL L ++
Sbjct: 323 HDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLDSCPVSLSELRTFLNED 382
Query: 1008 ESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQWFDELRTRFEHVETDIP 1187
E++LV EL SSVL EA+ W ++E KLDLHGMHLSS+YLI+LQW DE R RF + IP
Sbjct: 383 EALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIP 442
Query: 1188 AEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 1361
AE+ ++ GSGKHS VRG+SPVK LVK++MVRT SP+RIDRKN+G FIAKGK K WLC
Sbjct: 443 AEIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 500
>ref|NP_565402.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|13877877|gb|AAK44016.1|AF370201_1 unknown protein
[Arabidopsis thaliana] gi|21280879|gb|AAM44931.1| unknown
protein [Arabidopsis thaliana]
gi|330251481|gb|AEC06575.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 464 bits (1194), Expect = e-128
Identities = 237/418 (56%), Positives = 310/418 (74%), Gaps = 1/418 (0%)
Frame = +3
Query: 111 LSKQGQRFFTSLAT-SVTGDPLVTDRLIRKFIASSSKSVALNALSHLLTPNSSHSHLSSL 287
L K G RF +SL++ ++ GDP +R I+KF+A+S KSVALN LSHLL+ +SH HLS
Sbjct: 88 LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 147
Query: 288 AFPFYSLLTRAPWFSWNSKLVADVIALLYKQERFREADALISETVSKLDIRERELCTFYC 467
A YS +T A WF WN KL+A++IALL KQERF E++ L+S VS+L ER+ F C
Sbjct: 148 ALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLC 207
Query: 468 CLIEFHSKHKSKQGVFDSYTSLKQILSCSSSVYLKRRAYESMICSLCVIDLPREAENMME 647
L+E +SK S QG ++ L++I+ SSSVY+K +AY+SM+ LC +D P +AE ++E
Sbjct: 208 NLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIE 267
Query: 648 EMKVQGITSKPSLFELRSIVYAYGRVGLFKDMKRLLFEMESEGIKMDTVCFNMVLSSLGA 827
EM+++ I KP LFE +S++Y YGR+GLF DM R++ M +EG K+DTVC NMVLSS GA
Sbjct: 268 EMRMEKI--KPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGA 325
Query: 828 HAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPKSIPLSLNELLADLCDN 1007
H L +M SWLQ++K NVP SIRTYN+VLNSCP+I+SML+D S P+SL+EL L ++
Sbjct: 326 HDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLDSCPVSLSELRTFLNED 385
Query: 1008 ESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQWFDELRTRFEHVETDIP 1187
E++LV EL SSVL EA+ W ++E KLDLHGMHLSS+YLI+LQW DE R RF + IP
Sbjct: 386 EALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIP 445
Query: 1188 AEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 1361
AE+ ++ GSGKHS VRG+SPVK LVK++MVRT SP+RIDRKN+G FIAKGK K WLC
Sbjct: 446 AEIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 503
>ref|NP_849962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75244359|sp|Q8GWA9.1|PP157_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17033 gi|26452937|dbj|BAC43545.1| unknown protein
[Arabidopsis thaliana] gi|330251482|gb|AEC06576.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 505
Score = 464 bits (1194), Expect = e-128
Identities = 237/418 (56%), Positives = 310/418 (74%), Gaps = 1/418 (0%)
Frame = +3
Query: 111 LSKQGQRFFTSLAT-SVTGDPLVTDRLIRKFIASSSKSVALNALSHLLTPNSSHSHLSSL 287
L K G RF +SL++ ++ GDP +R I+KF+A+S KSVALN LSHLL+ +SH HLS
Sbjct: 89 LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 148
Query: 288 AFPFYSLLTRAPWFSWNSKLVADVIALLYKQERFREADALISETVSKLDIRERELCTFYC 467
A YS +T A WF WN KL+A++IALL KQERF E++ L+S VS+L ER+ F C
Sbjct: 149 ALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLC 208
Query: 468 CLIEFHSKHKSKQGVFDSYTSLKQILSCSSSVYLKRRAYESMICSLCVIDLPREAENMME 647
L+E +SK S QG ++ L++I+ SSSVY+K +AY+SM+ LC +D P +AE ++E
Sbjct: 209 NLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIE 268
Query: 648 EMKVQGITSKPSLFELRSIVYAYGRVGLFKDMKRLLFEMESEGIKMDTVCFNMVLSSLGA 827
EM+++ I KP LFE +S++Y YGR+GLF DM R++ M +EG K+DTVC NMVLSS GA
Sbjct: 269 EMRMEKI--KPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGA 326
Query: 828 HAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPKSIPLSLNELLADLCDN 1007
H L +M SWLQ++K NVP SIRTYN+VLNSCP+I+SML+D S P+SL+EL L ++
Sbjct: 327 HDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLDSCPVSLSELRTFLNED 386
Query: 1008 ESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQWFDELRTRFEHVETDIP 1187
E++LV EL SSVL EA+ W ++E KLDLHGMHLSS+YLI+LQW DE R RF + IP
Sbjct: 387 EALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIP 446
Query: 1188 AEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 1361
AE+ ++ GSGKHS VRG+SPVK LVK++MVRT SP+RIDRKN+G FIAKGK K WLC
Sbjct: 447 AEIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 504