BLASTX nr result

ID: Angelica23_contig00018380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00018380
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886344.1| predicted protein [Arabidopsis lyrata subsp....    70   1e-10
ref|XP_002297972.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002509975.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|NP_176626.1| glycine-rich uncharacterized protein [Arabidops...    69   3e-10
emb|CBI40552.3| unnamed protein product [Vitis vinifera]               66   3e-09

>ref|XP_002886344.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332185|gb|EFH62603.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/80 (45%), Positives = 44/80 (55%)
 Frame = +2

Query: 35  MHHPHTSKPRRCRTNLSSCTVXXXXXXXXXXXXXXXXXXXXKPKHPQLSVTSVEFPTFAL 214
           M  PH  +    RTNL+SC V                    KPK P++SV +V+ P+FA+
Sbjct: 1   MAKPHGRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAV 60

Query: 215 SNNTLNFTFFQYVTVTNPNR 274
           SNNT NFTF QYV V NPNR
Sbjct: 61  SNNTANFTFSQYVAVRNPNR 80


>ref|XP_002297972.1| predicted protein [Populus trichocarpa] gi|222845230|gb|EEE82777.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/80 (45%), Positives = 47/80 (58%)
 Frame = +2

Query: 35  MHHPHTSKPRRCRTNLSSCTVXXXXXXXXXXXXXXXXXXXXKPKHPQLSVTSVEFPTFAL 214
           M  PH  +P   RTN++SC V                    KPK P++SV +V+ P+FA+
Sbjct: 1   MSKPH--RPPSGRTNIASCIVATIFLIFVVIIILIVFFTVFKPKDPKISVNAVQLPSFAV 58

Query: 215 SNNTLNFTFFQYVTVTNPNR 274
           SNNT+NFTF QYV+V NPNR
Sbjct: 59  SNNTVNFTFSQYVSVKNPNR 78


>ref|XP_002509975.1| conserved hypothetical protein [Ricinus communis]
           gi|223549874|gb|EEF51362.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 205

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/80 (45%), Positives = 47/80 (58%)
 Frame = +2

Query: 35  MHHPHTSKPRRCRTNLSSCTVXXXXXXXXXXXXXXXXXXXXKPKHPQLSVTSVEFPTFAL 214
           M  PH  +P   RTNL+SC V                    KPK P++SV +V+ P+F++
Sbjct: 1   MSKPH--RPPSGRTNLASCIVATIFLIFVIIIILIVFFTVFKPKDPKISVNAVQLPSFSV 58

Query: 215 SNNTLNFTFFQYVTVTNPNR 274
           SNNT+NFTF QYV+V NPNR
Sbjct: 59  SNNTVNFTFSQYVSVKNPNR 78


>ref|NP_176626.1| glycine-rich uncharacterized protein [Arabidopsis thaliana]
           gi|6633834|gb|AAF19693.1|AC009519_27 F1N19.3
           [Arabidopsis thaliana]
           gi|12323476|gb|AAG51715.1|AC066689_14 hypothetical
           protein; 887-1915 [Arabidopsis thaliana]
           gi|34365707|gb|AAQ65165.1| At1g64450 [Arabidopsis
           thaliana] gi|110735737|dbj|BAE99848.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332196121|gb|AEE34242.1| glycine-rich uncharacterized
           protein [Arabidopsis thaliana]
          Length = 342

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/80 (43%), Positives = 44/80 (55%)
 Frame = +2

Query: 35  MHHPHTSKPRRCRTNLSSCTVXXXXXXXXXXXXXXXXXXXXKPKHPQLSVTSVEFPTFAL 214
           M  PH  +    RTNL+SC V                    KPK P++SV +V+ P+FA+
Sbjct: 1   MAKPHDRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAV 60

Query: 215 SNNTLNFTFFQYVTVTNPNR 274
           SNNT NF+F QYV V NPNR
Sbjct: 61  SNNTANFSFSQYVAVRNPNR 80


>emb|CBI40552.3| unnamed protein product [Vitis vinifera]
          Length = 130

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  SKPRRC-RTNLSSCTVXXXXXXXXXXXXXXXXXXXXKPKHPQLSVTSVEFPTFALSNNTL 229
           ++PRR  RTNL+SC V                    KPK P+++V ++ FPTF++SN T+
Sbjct: 2   NEPRRPGRTNLASCIVATVFLVLAVAVIVIVYLCVFKPKDPKIAVHAMRFPTFSISNGTV 61

Query: 230 NFTFFQYVTVTNPNRD 277
           +FTF QYV V NPNRD
Sbjct: 62  DFTFSQYVAVKNPNRD 77


Top