BLASTX nr result

ID: Angelica23_contig00018341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00018341
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   158   4e-37
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   152   4e-35
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              152   4e-35
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   152   4e-35
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   150   1e-34

>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  158 bits (400), Expect = 4e-37
 Identities = 73/91 (80%), Positives = 85/91 (93%)
 Frame = -3

Query: 275 RPLRDGDIVLINRPPSIHPHSLIALSVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVP 96
           RPL DGD VLINRPPSIH HSLIALSVK+LP  S+L++NPLIC+PFRGDFDGDC HGYVP
Sbjct: 407 RPLNDGDTVLINRPPSIHQHSLIALSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVP 466

Query: 95  QSMDSRVELQELVALDKQLIDIQSGQNLLSF 3
           QS+D+RVEL+ELVALDKQLI++Q+G+NLLSF
Sbjct: 467 QSVDTRVELRELVALDKQLINVQNGRNLLSF 497


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/90 (78%), Positives = 82/90 (91%)
 Frame = -3

Query: 275 RPLRDGDIVLINRPPSIHPHSLIALSVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVP 96
           RPL DGDIVLINRPPSIH HS+IALSVK+LP  S++S+NPL CSPFRGDFDGDC HGY+P
Sbjct: 434 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 493

Query: 95  QSMDSRVELQELVALDKQLIDIQSGQNLLS 6
           QS+DSRVEL ELVAL++QLI+ QSG+NLLS
Sbjct: 494 QSVDSRVELSELVALNRQLINRQSGRNLLS 523


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/90 (78%), Positives = 82/90 (91%)
 Frame = -3

Query: 275 RPLRDGDIVLINRPPSIHPHSLIALSVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVP 96
           RPL DGDIVLINRPPSIH HS+IALSVK+LP  S++S+NPL CSPFRGDFDGDC HGY+P
Sbjct: 377 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 436

Query: 95  QSMDSRVELQELVALDKQLIDIQSGQNLLS 6
           QS+DSRVEL ELVAL++QLI+ QSG+NLLS
Sbjct: 437 QSVDSRVELSELVALNRQLINRQSGRNLLS 466


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/90 (78%), Positives = 82/90 (91%)
 Frame = -3

Query: 275 RPLRDGDIVLINRPPSIHPHSLIALSVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVP 96
           RPL DGDIVLINRPPSIH HS+IALSVK+LP  S++S+NPL CSPFRGDFDGDC HGY+P
Sbjct: 404 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 463

Query: 95  QSMDSRVELQELVALDKQLIDIQSGQNLLS 6
           QS+DSRVEL ELVAL++QLI+ QSG+NLLS
Sbjct: 464 QSVDSRVELSELVALNRQLINRQSGRNLLS 493


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/90 (77%), Positives = 82/90 (91%)
 Frame = -3

Query: 275 RPLRDGDIVLINRPPSIHPHSLIALSVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVP 96
           RPL DGDIVL+NRPPSIH HSLIALSVK+LP  ++LSLNPL CSPFRGDFDGDC HGYVP
Sbjct: 413 RPLADGDIVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVP 472

Query: 95  QSMDSRVELQELVALDKQLIDIQSGQNLLS 6
           QS+++RVE++ELV+LDKQL + QSG+NLLS
Sbjct: 473 QSLEARVEVRELVSLDKQLTNGQSGRNLLS 502


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