BLASTX nr result

ID: Angelica23_contig00018331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00018331
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    60   1e-07
ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   1e-07
ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   1e-07
ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group] g...    57   1e-06
gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase fami...    57   2e-06

>ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            42-like [Cucumis sativus]
          Length = 1098

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5    GTPNVVLPGAIPAEPSTILATXXXXXXXXXXXXXXT-KLRQNLARIQAYTLPNRYEAELE 181
            G   + +PG +P  PS  L T                 L+ NLA+IQA  +P  YEAELE
Sbjct: 945  GVLGLTIPGTMPVIPSATLPTVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELE 1004

Query: 182  INDVPKNARWKV 217
            IND P+NARWKV
Sbjct: 1005 INDFPQNARWKV 1016


>ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
            [Cucumis sativus]
          Length = 1040

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5    GTPNVVLPGAIPAEPSTILATXXXXXXXXXXXXXXT-KLRQNLARIQAYTLPNRYEAELE 181
            G   + +PG +P  PS  L T                 L+ NLA+IQA  +P  YEAELE
Sbjct: 887  GVLGLTIPGTMPVIPSATLPTVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELE 946

Query: 182  INDVPKNARWKV 217
            IND P+NARWKV
Sbjct: 947  INDFPQNARWKV 958


>ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
            [Cucumis sativus]
          Length = 1118

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5    GTPNVVLPGAIPAEPSTILATXXXXXXXXXXXXXXT-KLRQNLARIQAYTLPNRYEAELE 181
            G   + +PG +P  PS  L T                 L+ NLA+IQA  +P  YEAELE
Sbjct: 965  GVLGLTIPGTMPVIPSATLPTVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELE 1024

Query: 182  INDVPKNARWKV 217
            IND P+NARWKV
Sbjct: 1025 INDFPQNARWKV 1036


>ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
            gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName: Full=DEAD-box
            ATP-dependent RNA helicase 42 gi|29467560|dbj|BAC66730.1|
            putative RNA helicase [Oryza sativa Japonica Group]
            gi|37806159|dbj|BAC99664.1| putative RNA helicase [Oryza
            sativa Japonica Group] gi|113623014|dbj|BAF22959.1|
            Os08g0159900 [Oryza sativa Japonica Group]
            gi|218200507|gb|EEC82934.1| hypothetical protein
            OsI_27901 [Oryza sativa Indica Group]
            gi|222639953|gb|EEE68085.1| hypothetical protein
            OsJ_26125 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +2

Query: 116  LRQNLARIQAYTLPNRYEAELEINDVPKNARWKV 217
            ++QNLARIQA+ +P  YEAELEIND P+NARWK+
Sbjct: 934  IQQNLARIQAHAVPEHYEAELEINDFPQNARWKI 967


>gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 1065

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +2

Query: 116  LRQNLARIQAYTLPNRYEAELEINDVPKNARWKV 217
            L+QNLARIQA+ +P  YEAELEIND P+NARW++
Sbjct: 950  LQQNLARIQAHAVPEHYEAELEINDFPQNARWRI 983


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