BLASTX nr result

ID: Angelica23_contig00018278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00018278
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   206   5e-51
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   200   3e-49
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   191   2e-46
gb|AFK46654.1| unknown [Lotus japonicus]                              184   1e-44
gb|AFK38566.1| unknown [Medicago truncatula]                          183   4e-44

>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  206 bits (524), Expect = 5e-51
 Identities = 93/156 (59%), Positives = 119/156 (76%)
 Frame = +1

Query: 175 MGFPVSYKDFSLPKFIDNTLCFLGLMKELLFIALFYYPGVENFVDPDISWPTRPKTRNDK 354
           MGFPV Y +  LPK + +TL  LG +++L+   LF Y G+ +F++PDISWP  P    + 
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLIN-TLFRYLGLPDFLEPDISWPETPSRVPEF 59

Query: 355 PTLLVVLTRELLPIMKYSEVVDPPESCAVCLYEFSDSEEIRRLTNCRHIFHRKCVDSWMD 534
            +   VL RE+LP++K+S++VDPP+SCAVCLYEF D +EIRRLTNCRHIFH+ C+D W+ 
Sbjct: 60  YSASAVLIREILPVVKFSDLVDPPDSCAVCLYEFEDHDEIRRLTNCRHIFHKACLDRWVG 119

Query: 535 HEHKTCPLCRTPFISDDMQEAFNERLWTASGISDFY 642
           ++ KTCPLCRTP I DDMQEAFNERLW ASGI DFY
Sbjct: 120 YDQKTCPLCRTPVIPDDMQEAFNERLWAASGIPDFY 155


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  200 bits (509), Expect = 3e-49
 Identities = 91/161 (56%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
 Frame = +1

Query: 175 MGFPVSYKDFSLPKFIDNTLCFLGLMKELLFIALFYYPGVENFVDPDISWPTRPKTRNDK 354
           MGFPV Y +  LPK   +TL FLG +++L+F +LF++ G+ +F++ D+SW        + 
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIF-SLFHFLGLSDFLETDVSWSETQAQVPEY 59

Query: 355 PTLLVVLTRELLPIMKYSEVV---DPPESCAVCLYEFSDSEEIRRLTNCRHIFHRKCVDS 525
           P +  VL RE+LP+MK+ E V   D PESCAVCLY+F   EEIRRLTNC+HIFHR C+D 
Sbjct: 60  PPVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDR 119

Query: 526 WMDHEHKTCPLCRTPFISDDMQEAFNERLWTASGISDFY*E 648
           WMDH+ KTCPLCRTPF+ D+MQ+ FN+RLW ASGI+DFY E
Sbjct: 120 WMDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITDFYSE 160


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  191 bits (484), Expect = 2e-46
 Identities = 90/161 (55%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
 Frame = +1

Query: 175 MGFPVSYKDFSLPKFIDNTLCFLGLMKELLFIALFYYPGVENFVDPDISWPTRPKTRNDK 354
           MGFPV Y +  LPK + +TL  LG +++L+    F + G+ +F++PDI W        + 
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISY-FFRFLGLTDFLEPDIVWTEGSTQVPEF 59

Query: 355 PTLLVVLTRELLPIMKYSEVV-----DPPESCAVCLYEFSDSEEIRRLTNCRHIFHRKCV 519
            ++  VL RE+LP+MK+ E+V     DPP+ CAVCLYEF   EEIRRLTNCRHIFHR C+
Sbjct: 60  QSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHRSCL 119

Query: 520 DSWMDHEHKTCPLCRTPFISDDMQEAFNERLWTASGISDFY 642
           D WMD + KTCPLCRTPFI DDMQEAFNERLW AS + DFY
Sbjct: 120 DRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPDFY 160


>gb|AFK46654.1| unknown [Lotus japonicus]
          Length = 167

 Score =  184 bits (468), Expect = 1e-44
 Identities = 83/155 (53%), Positives = 110/155 (70%)
 Frame = +1

Query: 175 MGFPVSYKDFSLPKFIDNTLCFLGLMKELLFIALFYYPGVENFVDPDISWPTRPKTRNDK 354
           MGFPV Y +F  PK +   L  LG +++L+   LF Y G+ +F++PDI WP       + 
Sbjct: 1   MGFPVGYTEFLFPKLVLQILSLLGFIRKLV-CTLFRYLGLPDFLEPDIVWPDNSTRIPEF 59

Query: 355 PTLLVVLTRELLPIMKYSEVVDPPESCAVCLYEFSDSEEIRRLTNCRHIFHRKCVDSWMD 534
            ++  +L RE+LP++K+ E+VDPPESC VCL EF +S+EIRRL NCRHIFHR C+D W+ 
Sbjct: 60  ESVSALLIREILPVVKFRELVDPPESCVVCLSEFEESDEIRRLANCRHIFHRACLDRWVG 119

Query: 535 HEHKTCPLCRTPFISDDMQEAFNERLWTASGISDF 639
           ++  TCPLCRTP I D+MQ AFNERLW ASGI +F
Sbjct: 120 YDQSTCPLCRTPLIPDEMQGAFNERLWAASGIPEF 154


>gb|AFK38566.1| unknown [Medicago truncatula]
          Length = 163

 Score =  183 bits (464), Expect = 4e-44
 Identities = 80/156 (51%), Positives = 112/156 (71%)
 Frame = +1

Query: 175 MGFPVSYKDFSLPKFIDNTLCFLGLMKELLFIALFYYPGVENFVDPDISWPTRPKTRNDK 354
           MGFPV Y +   PK + + L     +++L+   +F Y G+ +F++PDI WP       + 
Sbjct: 1   MGFPVGYTELLFPKLVLHLLSIFTFIRKLIN-TIFRYMGLPDFIEPDIIWPENSTRIPEF 59

Query: 355 PTLLVVLTRELLPIMKYSEVVDPPESCAVCLYEFSDSEEIRRLTNCRHIFHRKCVDSWMD 534
            ++  +L RE+LP++K+ E+VDPPESCAVCL EF +++EIRRL NCRHIFHR C+D WM 
Sbjct: 60  ESVSALLIREILPVVKFMELVDPPESCAVCLTEFEENDEIRRLANCRHIFHRGCLDRWMG 119

Query: 535 HEHKTCPLCRTPFISDDMQEAFNERLWTASGISDFY 642
           ++ +TCPLCRTPFI D++Q AFNERLW ASGI +F+
Sbjct: 120 YDQRTCPLCRTPFIPDELQSAFNERLWAASGIPEFH 155


Top