BLASTX nr result

ID: Angelica23_contig00018172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00018172
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...   231   2e-58
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...   230   2e-58
ref|XP_002307758.1| high mobility group family [Populus trichoca...   225   1e-56
gb|ABK95398.1| unknown [Populus trichocarpa]                          225   1e-56
ref|XP_002510615.1| transcription factor, putative [Ricinus comm...   217   3e-54

>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score =  231 bits (588), Expect = 2e-58
 Identities = 125/248 (50%), Positives = 152/248 (61%), Gaps = 37/248 (14%)
 Frame = +2

Query: 2   KRGGYDKVVSEKKWREISSMFGFSPTTTSASYALRKHYRSFLYYYEQVYFFKLQGSLLTP 181
           +RGG++KVV+EKKWRE+ S+F FSPTTTSAS+ LRKHY S LY+YEQVY F  QG +  P
Sbjct: 71  RRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICVP 130

Query: 182 RAPVTF---------------------------EATGTIDAKTDYCYLVSMKLGSETLNG 280
           +AP  F                           E TGTID K D  YLV++KLGSE L G
Sbjct: 131 QAPFPFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRG 190

Query: 281 VLYHPNHHKPSE------SAIMPYDLNXXXXXXXXXXXXXXMG----PKPNRSGYNFYFA 430
           VLYHP+   PS+      +AI+PY                  G    PKPNRSGYNF+FA
Sbjct: 191 VLYHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFA 250

Query: 431 EKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVKE 610
           EKH +LK   P +EREFTKMIGESW  LS EE+ VY  I +KDKERY++EL+EYKEK++ 
Sbjct: 251 EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRL 310

Query: 611 QEEANKEN 634
             E +  N
Sbjct: 311 GTEVDGAN 318


>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score =  230 bits (587), Expect = 2e-58
 Identities = 124/248 (50%), Positives = 152/248 (61%), Gaps = 37/248 (14%)
 Frame = +2

Query: 2   KRGGYDKVVSEKKWREISSMFGFSPTTTSASYALRKHYRSFLYYYEQVYFFKLQGSLLTP 181
           +RGG++KVV+EKKWRE+ S+F FSPTTTSAS+ LRKHY S LY+YEQVY F  QG +  P
Sbjct: 71  RRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICVP 130

Query: 182 RAPVTF---------------------------EATGTIDAKTDYCYLVSMKLGSETLNG 280
           +AP +F                           E TGTID K D  YLV++KLGSE L G
Sbjct: 131 QAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRG 190

Query: 281 VLYHPNHHKPSE------SAIMPYDLNXXXXXXXXXXXXXXMG----PKPNRSGYNFYFA 430
           VLYHP    PS+      +AI+PY                  G    PKPNRSGYNF+FA
Sbjct: 191 VLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFA 250

Query: 431 EKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVKE 610
           EKH +LK   P +EREFTKMIGESW  LS EE+ VY  I +KDKERY++EL+EYKEK++ 
Sbjct: 251 EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRM 310

Query: 611 QEEANKEN 634
             + +  N
Sbjct: 311 GTDVDGAN 318


>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| high mobility group family
           [Populus trichocarpa]
          Length = 329

 Score =  225 bits (573), Expect = 1e-56
 Identities = 122/248 (49%), Positives = 154/248 (62%), Gaps = 39/248 (15%)
 Frame = +2

Query: 5   RGGYDKVVSEKKWREISSMFGFSPTTTSASYALRKHYRSFLYYYEQVYFFKLQGSLLTPR 184
           RGGYDKVV+EKKWRE+ S+F FS TTTSAS+ L+KHY S LY+YEQV+FFK+QG + TP 
Sbjct: 72  RGGYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTPA 131

Query: 185 A---------------------PV------------TFEATGTIDAKTDYCYLVSMKLGS 265
                                 P+            +F A+GTI+ K D  YLVS++LGS
Sbjct: 132 VAFPLGSPSSKTELAIVEYSPEPIRDCPDPSTESSSSFSASGTIEGKFDCGYLVSVQLGS 191

Query: 266 ETLNGVLYHPNHHKPSES------AIMPYDLNXXXXXXXXXXXXXXMGPKPNRSGYNFYF 427
           E L+GVLYHP+    S S      AI+PY  N                PKPNRSGYNF+F
Sbjct: 192 EVLHGVLYHPDQQDLSNSIPQYDGAIVPYTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFF 251

Query: 428 AEKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVK 607
           AEKH +LK   P +EREFTKMIG+SW+ LS EE+ VY  I +KDKERY++EL+EYKEK++
Sbjct: 252 AEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKEKLQ 311

Query: 608 EQEEANKE 631
            ++    E
Sbjct: 312 LRQAMEVE 319


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  225 bits (573), Expect = 1e-56
 Identities = 122/248 (49%), Positives = 154/248 (62%), Gaps = 39/248 (15%)
 Frame = +2

Query: 5   RGGYDKVVSEKKWREISSMFGFSPTTTSASYALRKHYRSFLYYYEQVYFFKLQGSLLTPR 184
           RGGYDKVV+EKKWRE+ S+F FS TTTSAS+ L+KHY S LY+YEQV+FFK+QG + TP 
Sbjct: 60  RGGYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTPA 119

Query: 185 A---------------------PV------------TFEATGTIDAKTDYCYLVSMKLGS 265
                                 P+            +F A+GTI+ K D  YLVS++LGS
Sbjct: 120 VAFPLGSPSSKTELAIVEYSPEPIRDCPDPSTESSSSFSASGTIEGKFDCGYLVSVQLGS 179

Query: 266 ETLNGVLYHPNHHKPSES------AIMPYDLNXXXXXXXXXXXXXXMGPKPNRSGYNFYF 427
           E L+GVLYHP+    S S      AI+PY  N                PKPNRSGYNF+F
Sbjct: 180 EVLHGVLYHPDQQDLSNSIPQYDGAIVPYTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFF 239

Query: 428 AEKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVK 607
           AEKH +LK   P +EREFTKMIG+SW+ LS EE+ VY  I +KDKERY++EL+EYKEK++
Sbjct: 240 AEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKEKLQ 299

Query: 608 EQEEANKE 631
            ++    E
Sbjct: 300 LRQAMEVE 307


>ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
           gi|223551316|gb|EEF52802.1| transcription factor,
           putative [Ricinus communis]
          Length = 338

 Score =  217 bits (552), Expect = 3e-54
 Identities = 119/257 (46%), Positives = 156/257 (60%), Gaps = 47/257 (18%)
 Frame = +2

Query: 2   KRGGYDKVVSEKKWREISSMFGFSPTTTSASYALRKHYRSFLYYYEQVYFFKLQG----- 166
           KRGGY+KVV++KKWRE+ S+F FSPTTTSAS+ LRKHY   LY+YEQV+FFK+QG     
Sbjct: 73  KRGGYEKVVADKKWREVGSVFKFSPTTTSASFVLRKHYFGLLYHYEQVHFFKVQGPMSSS 132

Query: 167 --------SLLTPRAPV--------------------TFEATGTIDAKTDYCYLVSMKLG 262
                   +L  P   +                    +F A GTID K D  YLVS+++G
Sbjct: 133 AAAFPGNSTLFRPELAIVEYSPEVIKHRPEPPSEGSSSFSALGTIDGKFDCGYLVSVRVG 192

Query: 263 SETLNGVLYHPNHHKPS--------ESAIMPY------DLNXXXXXXXXXXXXXXMGPKP 400
           SE L+GVLYHP+  + S        ++A++PY      D +                PKP
Sbjct: 193 SEVLSGVLYHPDQPQHSFSSISQCNDNALIPYTGSRRRDHSARRRRRRSRRAGDPSYPKP 252

Query: 401 NRSGYNFYFAEKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKE 580
           NRSGYNF+FAEKH +LK   P +EREFTK+IG+SW+ LS EE+ VY  I +KDKERY++E
Sbjct: 253 NRSGYNFFFAEKHYKLKSLYPNREREFTKIIGQSWSNLSAEERMVYQNIGLKDKERYKRE 312

Query: 581 LREYKEKVKEQEEANKE 631
           L+EYKE++K +E    E
Sbjct: 313 LKEYKERLKLRETMELE 329


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