BLASTX nr result

ID: Angelica23_contig00018171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00018171
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307758.1| high mobility group family [Populus trichoca...    57   2e-06
gb|ABK95398.1| unknown [Populus trichocarpa]                           57   2e-06
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...    55   5e-06
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...    55   5e-06
ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-l...    55   8e-06

>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| high mobility group family
           [Populus trichocarpa]
          Length = 329

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -3

Query: 383 SMFGFSPTTTSASYALRKHYRSFIYYYE*VYFFKLQASVLTP 258
           S+F FS TTTSAS+ L+KHY S +Y+YE V+FFK+Q  V TP
Sbjct: 89  SVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTP 130


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -3

Query: 383 SMFGFSPTTTSASYALRKHYRSFIYYYE*VYFFKLQASVLTP 258
           S+F FS TTTSAS+ L+KHY S +Y+YE V+FFK+Q  V TP
Sbjct: 77  SVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTP 118


>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = -3

Query: 383 SMFGFSPTTTSASYALRKHYRSFIYYYE*VYFFKLQASVLTP 258
           S+F FSPTTTSAS+ LRKHY S +Y+YE VY F  Q  +  P
Sbjct: 89  SVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICVP 130


>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = -3

Query: 383 SMFGFSPTTTSASYALRKHYRSFIYYYE*VYFFKLQASVLTP 258
           S+F FSPTTTSAS+ LRKHY S +Y+YE VY F  Q  +  P
Sbjct: 89  SVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICVP 130


>ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-like [Glycine max]
          Length = 322

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -3

Query: 383 SMFGFSPTTTSASYALRKHYRSFIYYYE*VYFFKLQASVLTP 258
           S+F F+ TTTSAS+ LRKHY S +Y+YE V+FFK +  + TP
Sbjct: 87  SVFKFAATTTSASFVLRKHYFSLLYHYEQVHFFKARGPIYTP 128


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