BLASTX nr result

ID: Angelica23_contig00017972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017972
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA05625.1| DNA-binding protein [Daucus carota]                   152   3e-35
dbj|BAA05623.1| DNA-binding protein [Daucus carota]                   116   2e-24
gb|ABL63116.1| DNA-binding protein [Catharanthus roseus]               62   6e-08

>dbj|BAA05625.1| DNA-binding protein [Daucus carota]
          Length = 308

 Score =  152 bits (384), Expect = 3e-35
 Identities = 83/137 (60%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
 Frame = +1

Query: 1   QILALKNGEPTESINLNKXXXXXXXXXXXXXXXXIKPDFWRXXXXXXXXXXXXXXXXXXX 180
           QI+ALKNGEPTESINLNK                IKPDF R                   
Sbjct: 188 QIMALKNGEPTESINLNKETEGSSSNRSTENSSEIKPDFSR------------------- 228

Query: 181 XXXXXXTPPAIDSHPHKLTSIPLFPPPNN--KSNFVRLQQPA-FQMSRPTDHPHQQSVKE 351
                 T PAIDSHPHKLTSIPLFPPPNN  KS+F RLQQPA F MSRP+DHPHQQSVKE
Sbjct: 229 ------TSPAIDSHPHKLTSIPLFPPPNNNNKSSFFRLQQPAAFHMSRPSDHPHQQSVKE 282

Query: 352 EHFCNMFNGVDDQTVFW 402
           EHFCNMF GV+DQT FW
Sbjct: 283 EHFCNMFTGVEDQTAFW 299


>dbj|BAA05623.1| DNA-binding protein [Daucus carota]
          Length = 301

 Score =  116 bits (291), Expect = 2e-24
 Identities = 69/135 (51%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   QILALKNGEPTESINLNKXXXXXXXXXXXXXXXX-IKPDFWRXXXXXXXXXXXXXXXXXX 177
           QILALKN EPT+SINLNK                 IKPDF R                  
Sbjct: 187 QILALKNREPTDSINLNKETEGSSSNNRSTENSYEIKPDFSR------------------ 228

Query: 178 XXXXXXXTPPAIDSHPHKLTSIPLFPPPNNKSNFVRLQQPAFQMSRPTDHPHQQSVKEEH 357
                  TPPAIDS+P K+TSIP FPP  N SNF+RLQQPA  +SRP+DH H Q VKEE 
Sbjct: 229 -------TPPAIDSYPQKITSIPFFPP--NTSNFIRLQQPALHLSRPSDHHHHQPVKEED 279

Query: 358 FCNMFNGVDDQTVFW 402
           FCNM   +DDQT FW
Sbjct: 280 FCNM---LDDQTAFW 291


>gb|ABL63116.1| DNA-binding protein [Catharanthus roseus]
          Length = 263

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 55/150 (36%), Positives = 61/150 (40%), Gaps = 16/150 (10%)
 Frame = +1

Query: 1   QILALKNGEPTESINLNKXXXXXXXXXXXXXXXXIKPDFWRXXXXXXXXXXXXXXXXXXX 180
           +I+ALKN EPTESINLNK                IK D  R                   
Sbjct: 132 EIMALKNREPTESINLNKETEGSCSNRSENSSDNIKLDISR------------------- 172

Query: 181 XXXXXXTPPAIDSHPHKLTSIPLFPPPNNKSNFV-RLQQPAFQMSR--PTDHPH------ 333
                 T PAIDSHP   TS P FP    + N   +L Q     SR  P DH H      
Sbjct: 173 ------TTPAIDSHPQ--TSRPFFPSSLIRPNTAQQLFQTTSSSSRPPPADHHHLIQCQN 224

Query: 334 ------QQSVKEE-HFCNMFNGVDDQTVFW 402
                   +VKEE   CNMF  +DDQT FW
Sbjct: 225 NNNNNPTATVKEESSLCNMFCTIDDQTGFW 254


Top