BLASTX nr result

ID: Angelica23_contig00017933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017933
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31382.3| unnamed protein product [Vitis vinifera]              422   e-115
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   418   e-114
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   407   e-111
ref|XP_002532622.1| Far upstream element-binding protein, putati...   402   e-110
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   392   e-106

>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  422 bits (1084), Expect = e-115
 Identities = 226/337 (67%), Positives = 264/337 (78%), Gaps = 2/337 (0%)
 Frame = -2

Query: 1386 YTHTVDTMESPDSRYASSNEAPXXXXXXQSSPRNSHDDGGGGGDYAEKSTYTRFLVSNAE 1207
            + H +  MESP+S Y SS E P         P+ S        D+ EKSTY RFLVSNA 
Sbjct: 42   HLHQISFMESPESAYVSSPEVP---------PKRSSPPRSPTSDFMEKSTYIRFLVSNAA 92

Query: 1206 AGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTVNNVLKGVELILDKL 1027
            AGSVIGKGGSTI++FQSQSGARIQLSRN+EFFPGTSDRIIM+SG  N ++K +ELIL KL
Sbjct: 93   AGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKL 152

Query: 1026 LNEFYLEEGD-AEPRSKVRLVVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDNSYAG 850
            L+E + E+GD A+PRSKVRL+VPNSSC       G+TIKSFIE+SQA IKISPQDN+Y G
Sbjct: 153  LSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLG 212

Query: 849  ISDRLVTVAGTLEEQMRAIDLILSKLSEDSYYIQSMSTPFPY-AGYNATNYGPNGGGGKF 673
            ++DRLVT+ G+LEEQMRAIDLILSKL+ED +Y Q M+ PF Y A YN+ NYGPNG GGKF
Sbjct: 213  LTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKF 272

Query: 672  QNHRPHNNKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEISQVSGARIKISDRD 493
            QN++           +DR SNSVTIGVADEHIGLV+GRGGRN+++ISQ SGARIKISDR 
Sbjct: 273  QNNK-----------EDR-SNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRG 320

Query: 492  DFMSGTTDRKVTITGSQRAIRTAEDMITQKVSSATDR 382
            DFMSGTTDRKVTITGSQRAIR AE MI QKV+SA++R
Sbjct: 321  DFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  418 bits (1075), Expect = e-114
 Identities = 225/330 (68%), Positives = 261/330 (79%), Gaps = 2/330 (0%)
 Frame = -2

Query: 1365 MESPDSRYASSNEAPXXXXXXQSSPRNSHDDGGGGGDYAEKSTYTRFLVSNAEAGSVIGK 1186
            MESP+S Y SS E P         P+ S        D+ EKSTY RFLVSNA AGSVIGK
Sbjct: 1    MESPESAYVSSPEVP---------PKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGK 51

Query: 1185 GGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTVNNVLKGVELILDKLLNEFYLE 1006
            GGSTI++FQSQSGARIQLSRN+EFFPGTSDRIIM+SG  N ++K +ELIL KLL+E + E
Sbjct: 52   GGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTE 111

Query: 1005 EGD-AEPRSKVRLVVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDNSYAGISDRLVT 829
            +GD A+PRSKVRL+VPNSSC       G+TIKSFIE+SQA IKISPQDN+Y G++DRLVT
Sbjct: 112  DGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVT 171

Query: 828  VAGTLEEQMRAIDLILSKLSEDSYYIQSMSTPFPY-AGYNATNYGPNGGGGKFQNHRPHN 652
            + G+LEEQMRAIDLILSKL+ED +Y Q M+ PF Y A YN+ NYGPNG GGKFQN++   
Sbjct: 172  LMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNK--- 228

Query: 651  NKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEISQVSGARIKISDRDDFMSGTT 472
                    +DR SNSVTIGVADEHIGLV+GRGGRN+++ISQ SGARIKISDR DFMSGTT
Sbjct: 229  --------EDR-SNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTT 279

Query: 471  DRKVTITGSQRAIRTAEDMITQKVSSATDR 382
            DRKVTITGSQRAIR AE MI QKV+SA++R
Sbjct: 280  DRKVTITGSQRAIRAAESMIMQKVASASER 309


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
            gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
            protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  407 bits (1045), Expect = e-111
 Identities = 220/333 (66%), Positives = 264/333 (79%), Gaps = 4/333 (1%)
 Frame = -2

Query: 1365 MESPDSRYASSNEAPXXXXXXQSSPRNSHDDGGGGGDYAEKSTYTRFLVSNAEAGSVIGK 1186
            MES +S Y SS EAP           NS        D  EK+TY RFLVSNA AGSVIGK
Sbjct: 1    MESTESSYVSSPEAPAKRSPPPPKSPNS--------DNMEKATYIRFLVSNAAAGSVIGK 52

Query: 1185 GGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTVNNVLKGVELILDKLLNEFYLE 1006
            GGSTI++FQSQSGARIQLSRN+EFFPGT+DRIIMVSG++N +LK +EL+L KLL+E + E
Sbjct: 53   GGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAE 112

Query: 1005 EG-DAEPRSKVRLVVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDNSYAGISDRLVT 829
            EG D EPR+KVRL+VP+SSC       G+TIKSFIE+SQAGIKISPQDN+Y   +DRLVT
Sbjct: 113  EGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVT 172

Query: 828  VAGTLEEQMRAIDLILSKLSEDSYYIQSMSTPFPY-AGYNATNYGPNGG--GGKFQNHRP 658
            ++GT+EEQMRA DLI+SKLSED +Y QSM+ PF Y   +NA NYG NGG  GG+FQN++P
Sbjct: 173  LSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKP 232

Query: 657  HNNKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEISQVSGARIKISDRDDFMSG 478
             + +   ++Q++RN NS+TIGV+D HIGLV+GRGGRN++EISQ SGARIKISDR DFMSG
Sbjct: 233  -DTRSSEIVQEERN-NSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSG 290

Query: 477  TTDRKVTITGSQRAIRTAEDMITQKVSSATDRV 379
            TTDRKVTITGSQRAIR AE MI QKV+ A++RV
Sbjct: 291  TTDRKVTITGSQRAIRAAESMILQKVAYASERV 323


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  402 bits (1034), Expect = e-110
 Identities = 220/330 (66%), Positives = 257/330 (77%), Gaps = 2/330 (0%)
 Frame = -2

Query: 1365 MESPDSRYASSNEAPXXXXXXQSSPRNSHDDGGGGGDYAEKSTYTRFLVSNAEAGSVIGK 1186
            MES +S Y SS EAP          R+         D  EK TY RFLVSNA AGSVIGK
Sbjct: 1    MESTESSYVSSPEAPPRK-------RSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGK 53

Query: 1185 GGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTVNNVLKGVELILDKLLNEFYLE 1006
            GG+TI++FQSQSGARIQLSRNYEFFPGTSDRII++SG +++VLKGVEL+L KLL+E + E
Sbjct: 54   GGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTE 113

Query: 1005 EG-DAEPRSKVRLVVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDNSYAGISDRLVT 829
            +G D +PR+KVRLVVPNSSC       G+ IKSFIEESQAGIKISPQDN++ G++DRLVT
Sbjct: 114  DGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVT 173

Query: 828  VAGTLEEQMRAIDLILSKLSEDSYYIQSMSTPFPYA-GYNATNYGPNGGGGKFQNHRPHN 652
            V GTLEEQMRAIDLILSKL +D +Y+Q+M  PF YA  YN+ NYG NG GGKFQN++   
Sbjct: 174  VTGTLEEQMRAIDLILSKLYDDPHYVQTMHAPFSYAVAYNSMNYGANGAGGKFQNNK--- 230

Query: 651  NKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEISQVSGARIKISDRDDFMSGTT 472
                    +DR +NSVTIGVAD HIGLV+GRGGRN++EISQVSGARIKISDR DFMSGT 
Sbjct: 231  --------EDR-TNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTN 281

Query: 471  DRKVTITGSQRAIRTAEDMITQKVSSATDR 382
            DRK+ ITGSQRAIRTAE MI QKV+ A++R
Sbjct: 282  DRKIIITGSQRAIRTAEGMIMQKVAYASER 311


>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  392 bits (1007), Expect = e-106
 Identities = 221/353 (62%), Positives = 255/353 (72%), Gaps = 23/353 (6%)
 Frame = -2

Query: 1365 MESPDSRYASSNEAPXXXXXXQSSPRNSHDDGGGGGDYAEKSTYTRFLVSNAEAGSVIGK 1186
            MESP+S Y SS E P       S P +S        D  EK TY RFLVSN+ AGSVIGK
Sbjct: 1    MESPESSYVSSPEGPRKHAS--SPPPDSPSQ-----DSVEKPTYVRFLVSNSAAGSVIGK 53

Query: 1185 GGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTVNNVLKGVELILDKLLNEFYLE 1006
            GGSTI++FQSQSGARIQLSRN EFFPGT+DRIIMVSG +N VL+ VELIL KLL+E + E
Sbjct: 54   GGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSE 113

Query: 1005 E-GDAEPRSKVRLVVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDNSYAGISDRLVT 829
            +  D EP++KVRL+VPN SC       GATI+SFIEESQAGIKISPQDNSY G +DR+VT
Sbjct: 114  DDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVT 173

Query: 828  VAGTLEEQMRAIDLILSKLSEDSYYIQSMSTPFPYAG----------------------Y 715
            V GTL+EQMR IDLI+SKL+ED +Y  SMS+PF Y+G                      Y
Sbjct: 174  VTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAY 233

Query: 714  NATNYGPNGGGGKFQNHRPHNNKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEI 535
            N  NY PNG G KFQN +           +DR SNS+TIGVADEHIGLV+GRGGRN+ +I
Sbjct: 234  NGVNYRPNGTGAKFQNSK-----------EDR-SNSMTIGVADEHIGLVVGRGGRNISDI 281

Query: 534  SQVSGARIKISDRDDFMSGTTDRKVTITGSQRAIRTAEDMITQKVSSATDRVE 376
            SQ SGA+IKISDR D++SGTTDRKVTITGSQRAIRTAE MI QKV+ AT+RVE
Sbjct: 282  SQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATERVE 334


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